Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy10g2072 | ATGGCAGTGACATGGAATATTACGTGCACATATTCCCAATTTTTGGCTCACAAAAATCCCAGTTGCTGCGTCTCAATGTCATCCTTCTACAATGACAGCATTGCAACCTGCTCCAAATGTTCTTGCGGCTGCCAAAGCAACATGGTTCAGACAGGAAGCTGCATTGAGGCAAATTCACATTACTTATCACCCGTCGTTTCCAACTCTGGCAAGAACTTTGAACCTCTGGTTCAATGTACAAGCCACATGTGTCCGATCCGAGTACACTGGCACATTAAGCTCAACTACAGAGAATACTGGAGAGTCAAGATCACCATTACAAACTTCAACTACAGAAGGAACTATTCAGACTGGAACTTAGTCATTCAGCACCCCAACCTCAGCAATGTGACAAAGATATTCAGTTTCAACTACAAGTCTCTTGCTCCTTATGCCACAATAAATGATACAGCAATGGTATGGGGAATCAAGTTCTACAACAATATGCTAATACAAGCGGGTCCTCTTGGTAATGTACAGACAGAGGTGATTTTTGGAAAGGATAAAGAAACCTTTACGTTTGACGAAGGTTGGGCCTTCCCTCGAAGGATCTACTTTAATGGCGAAAACTGCGTCATGCCGCCTCCCGACGCCTATCCGCGGTTGCCGAACGCCGGTTCCGATGAAAAGATCTCCATTTTTGCTCTCATTTTAGCTTCTCTGTCTCTCAGCTTTCTTTTATGA | 723 | 43.98 | MAVTWNITCTYSQFLAHKNPSCCVSMSSFYNDSIATCSKCSCGCQSNMVQTGSCIEANSHYLSPVVSNSGKNFEPLVQCTSHMCPIRVHWHIKLNYREYWRVKITITNFNYRRNYSDWNLVIQHPNLSNVTKIFSFNYKSLAPYATINDTAMVWGIKFYNNMLIQAGPLGNVQTEVIFGKDKETFTFDEGWAFPRRIYFNGENCVMPPPDAYPRLPNAGSDEKISIFALILASLSLSFLL | 240 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 44778854 | 44780019 | + | Maker00039722 | Lcy10g2072 | 645583 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy10g2072 | 240 | PANTHER | PROTEIN COBRA | 3 | 233 | IPR006918 | GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g2072 | Lcy-Chr10:44778854 | Lcy3g0307 | Lcy-Chr3:9754620 | 7.13E-132 | dispersed | |
| Lcy10g2072 | Lcy-Chr10:44778854 | Lcy3g0306 | Lcy-Chr3:9754620 | 3.99E-106 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy10g2072 | - | - | - | 0.0 |