Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g2074 ATGGCGCTGGCCTTAGCCATTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGCTCTGCTTTACTGCGATGGAATGAAGTTCGATACAGTAAAAAGGGGCTGCCTCCTGGTACAATGGGCTGGCCTGTTTTTGGTGAAACCACTGAGTTTCTCAAACAAGGTCCTAACTTTATGAAATCCCAGAGAGCAAGGTATGGAAGCATTTTCAAGTCCCATATTTTGGGCTGTCCTACCATTGTTTCTATGGATCCTGAGGTTAATAGATATGTTTTAATGAATGAATCAAAAGGGCTTGTCCCTGGCTACCCTCAGTCCATGCTTGATATCCTTGGCAAATGCAATATCGCCGCCGTCCACGGCGGCGCTCACAAGCTGATGAGAGCTGCTCTGCTCGCCGTTGTCAGCCCCACCATGATTAAGGACCGTCTTCTTCCTAAAGTTGATGAATTTATGCGATCCCATTTGAGGAATTGGGATCAACAAATCATTGACATCCAGGACAAGACTAAAGAGATGGCTCTCCGGTCGTCTTTGAAGCAGATTGCCGGGATCGAGTCCGGTCCGTTATCGGAATCTTTCATCCCGGAGTTCTTTAAGCTTGTTCTCGGCACCCTCTCGCTCCCCATCGATCTCCCCGGCACCAACTACTGCCGAGGAATTCAGGCGAGGAAGAACATAATAAAGCTGTTGCAGCAGCTGATAAACGAGAGAAGAGCCTCAGAGACAAAGAAAGATGACATGCTTGGATATTTCATGAGTGAAGAGAACAAATACAAGCTAAACGATGAAGAGATTATCGATCAGATCATAACAGTTCTGTACTCTGGCTATGAAACTGTTTCGACAACTTCTATGATGGCTGTCAAGTTCCTCCATGATCATCCCAAAGTTCTTCAGCAAATCAGAGAAGAGCATTTGGCAATCAGAGAAAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCCATGAAGTTCACTCGTGCGGTGATATTTGAAACATCAAGGCTGGCCACAATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAACTAAATGGTGGAACCAGACATTGTCCTGGCAAAGAACTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTGTTGAAATTTCCAAGAGTGGAAGCTCCAAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1239 44.55 MALALAILALFLLLCFCSALLRWNEVRYSKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRAALLAVVSPTMIKDRLLPKVDEFMRSHLRNWDQQIIDIQDKTKEMALRSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDLPGTNYCRGIQARKNIIKLLQQLINERRASETKKDDMLGYFMSEENKYKLNDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQIREEHLAIREKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44811943 44815061 + Maker00039881 Lcy10g2074 645585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g2074 412 PANTHER CYTOCHROME P450 26 33 355 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Lcy10g2074 412 Gene3D Cytochrome P450 358 395 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy10g2074 412 CDD CYP90-like 60 410 - -
Lcy10g2074 412 SUPERFAMILY Cytochrome P450 27 392 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy10g2074 412 Gene3D Cytochrome P450 24 357 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy10g2074 412 Pfam Cytochrome P450 34 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2074 Lcy-Chr10:44811943 Lcy6g1968 Lcy-Chr6:41800985 3.19E-65 dispersed
Lcy10g2074 Lcy-Chr10:44811943 Lcy13g2072 Lcy-Chr13:39626229 7.76E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g2074 K09590 - csv:101206858 736.873