Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g2218 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCATTGTGCAGTTTCTTTAGGATATAACGAGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATCGATATACTAAAGAACTCAATTAATGAGGATGAAGCACACTCAAAGGGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCAGTAACATCACAATTTGATAAGCTAAGGGCCATTCGGTTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAACCAAGTTAATAAACCACGTTCTGCAAATGCCCCTGAATATAATAATACGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGACGAAACTCGTGCACTTCAGGTTGAATTGACTAGTCTACTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTGAATCACCTAATGTCTACGCACGTTTTGCAGCAAGCACAACAAATTGAACTTCTTTATGAACAGAAGCAAGAAAAAGATGAAGTTACCAATGGAAATTTGGATCACATTTTTGTTGCTGTAAGAGTGAACTCATTTGCTACTTCAATTTCTCAAAGTGCCCTGCATTCATTTGTAGCTGCTGAAGCATGA 828 39.73 MAKFRDRTEDFKDVVRHCAVSLGYNELESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNSINEDEAHSKGWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPEYNNTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQKQEKDEVTNGNLDHIFVAVRVNSFATSISQSALHSFVAAEA 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46048930 46051916 - Maker00039225 Lcy10g2218 645729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g2218 275 Coils Coil 66 86 - -
Lcy10g2218 275 PANTHER SYNTAXIN-18 1 245 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Lcy10g2218 275 MobiDBLite consensus disorder prediction 148 162 - -
Lcy10g2218 275 SUPERFAMILY t-snare proteins 39 229 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Lcy10g2218 275 MobiDBLite consensus disorder prediction 141 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2218 Lcy-Chr10:46048930 Lcy4g1484 Lcy-Chr4:37149197 2.51E-128 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g2218 K08492 - csv:101207161 429.098