Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g2218 | ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCATTGTGCAGTTTCTTTAGGATATAACGAGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATCGATATACTAAAGAACTCAATTAATGAGGATGAAGCACACTCAAAGGGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCAGTAACATCACAATTTGATAAGCTAAGGGCCATTCGGTTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAACCAAGTTAATAAACCACGTTCTGCAAATGCCCCTGAATATAATAATACGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGACGAAACTCGTGCACTTCAGGTTGAATTGACTAGTCTACTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTGAATCACCTAATGTCTACGCACGTTTTGCAGCAAGCACAACAAATTGAACTTCTTTATGAACAGAAGCAAGAAAAAGATGAAGTTACCAATGGAAATTTGGATCACATTTTTGTTGCTGTAAGAGTGAACTCATTTGCTACTTCAATTTCTCAAAGTGCCCTGCATTCATTTGTAGCTGCTGAAGCATGA | 828 | 39.73 | MAKFRDRTEDFKDVVRHCAVSLGYNELESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNSINEDEAHSKGWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPEYNNTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQKQEKDEVTNGNLDHIFVAVRVNSFATSISQSALHSFVAAEA | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 46048930 | 46051916 | - | Maker00039225 | Lcy10g2218 | 645729 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g2218 | 275 | Coils | Coil | 66 | 86 | - | - | |
Lcy10g2218 | 275 | PANTHER | SYNTAXIN-18 | 1 | 245 | - | GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER) | |
Lcy10g2218 | 275 | MobiDBLite | consensus disorder prediction | 148 | 162 | - | - | |
Lcy10g2218 | 275 | SUPERFAMILY | t-snare proteins | 39 | 229 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Lcy10g2218 | 275 | MobiDBLite | consensus disorder prediction | 141 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g2218 | Lcy-Chr10:46048930 | Lcy4g1484 | Lcy-Chr4:37149197 | 2.51E-128 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g2218 | K08492 | - | csv:101207161 | 429.098 |