Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g2283 ATGGAAGTTGAAGCGCAATCTGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGCGAAATCTTGGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCCGGCAGGGAAATCTTTTGCCCAATTGTTGGCTGCGGTGCGCACTTAAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCCTGTTCAGTTTGCCCTAGAGTTTACCCAACATCACGCCTCCTTAGTCTGCATGTGTCTGAGACGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGCATGTTCTTGTTAAATGGATATCATTGGTTCGTTGTTTTTTGTTTGATACAAATGTATACTGTGTGTCACAGTACGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAGAGCTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAGTTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCCAAGAAACAAAGACAGAAATTACATCGTAAACAAGTACTTCAAGAAAGGGAAGAAACTTCCAAAATGGAAGTCGAGAATGAAACTATGGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCATCGTCAGTCAGCTTTGGTCGAAGGCACACTCGAGGGTTAACATTTGTTCCTCGATCAGTTCAGCGTGAAAAAGTGCCAGACTCCTCTGCAGCCGGAACAAATAGATAA 822 43.67 MEVEAQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAGREIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSETHDSFFQAKVARGYDMHVLVKWISLVRCFLFDTNVYCVSQYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQVLQEREETSKMEVENETMDGLISGVSKLSTSDSTPSSVSFGRRHTRGLTFVPRSVQREKVPDSSAAGTNR 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46496613 46498471 - Maker00039712 Lcy10g2283 645794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g2283 273 MobiDBLite consensus disorder prediction 194 273 - -
Lcy10g2283 273 MobiDBLite consensus disorder prediction 202 217 - -
Lcy10g2283 273 ProSitePatterns Zinc finger C2H2 type domain signature. 154 177 IPR013087 -
Lcy10g2283 273 PANTHER UNCHARACTERIZED 5 262 IPR039258 -
Lcy10g2283 273 SMART c2h2final6 90 113 IPR013087 -
Lcy10g2283 273 SMART c2h2final6 152 177 IPR013087 -
Lcy10g2283 273 SMART c2h2final6 63 88 IPR013087 -
Lcy10g2283 273 MobiDBLite consensus disorder prediction 225 246 - -
Lcy10g2283 273 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19061 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g2283 - - - 0.0