Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g2390 ATGGATCAAGTAGATCAAATTGAGGAAGGAAGCTCCAGATTGTTGGGGGGCCATAGCGTTGCTGGGAGCAGTAATGATTACAGGTGGGTTGATGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCACTCTTAGAAGAAAGAGAAAGCGGAGAAGGATATGGATCTGTGAGGAGGAGGTTAGTTAAGAAGCCCAAGAGAGTCGATTCTTTTGACGTTGAAGCAATGGAGATTGCTGACACTAACTATCATCATTTAAAGGATGTTTCCACGTGGCAAACTCTTGCTATAGCATTTCAAACGCTTGGTGTTGTATATGGTGACATGGGTACAAGCCCATTATACGTCTTTGCTGACGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTAGTTCTCAGAGCCAACGACAATGGTGAAGGAGGAACATTTGCATTGTATTCACTGATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTCAAACTACCCACTCCAGAGTTGGAAAGGGCCTTACACATCAAAGAGACTCTCGAGAAGAGATCATCCTTGAAAACTCTTATATTGTTGCTGGTCCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTTTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTTGTCATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACTGGCAAAGTTGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGTCTGGGATCTATTGGAATTTACAATCTAGTGAAGTATGATCTCACCGTTGTAAGGGCTCTCAATCCCGCTTACATCTATTTATTCTTCAAGAAAAATTCAAATAATGCTTGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGGCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCTTACATGGGCCAGGCTGCATACCTAATGAAACATCCAGATGCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCTACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCGAGAATGAAGATAGTTCACACATCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAACTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCTATATTTCAGAGGACTACAGATATTGCCAATGCTTATGGTTACGTTCCTTCCTCCTCATTTTTTCTCTCTTATAGCATACATTTGCTTTGCATCTTTACTGGAGCTGACTGCTGTATTATAATCTGTAATCAACCCACGCTCTTGATTGCTATCACGAGTATTGCTGAAGTTGGTGTGATGCTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTTCTGATCTGGCAGACAAATTTGTTTCTTGCGTTGTGTTTCCCACTTGTATTTGGGTCAGTGGAATTTATCTACTTATCTGCAGTTTTATCAAAAATCAGCGAGGGTGGGTGGTTGCCACTTGCTTTTGCTTTTATCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGAGAAGATATCGATTGATTTCTTGCTTGAACTGGGATCTACCCTCGGGACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATCGTGTTTGTGTGCATCAAATATGTTCCTATCCCTGTGGTTCCGCAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTTCGTTGCATCGCGAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAAAGCCTTGAGAAGTTCTTAAGGAAGGAGGCTCAAGATCTTGCATTGGAGAGCAATTTGAATGTGTTGGAATTTGATAATATTTCAGAGAGGCCGCGGAATTCTCCCACTCTAGGTGTGGTTGATGTGAATGAGCTGAGAATTCCATTGATGGAAGAGGCAAGAACTATGAGTTCAGATGAAGGTTTTGGGGCCCCGTTGCCATCTAGCATTATGGCATCAGATGACGACCCTAGTCTGGAGTATGAGCTGTCAGCTCTTCGAGAAGCAATGGATTCAGGATTTACATATCTACTGGCACAAGGAGATGTCCGAGCAAAGAAAAATTCATTTTTTATTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCGACTATGCGAGTTCCTCACATGAATATCATGCAAGTTGGGATGACTTACATGGACATAACTACCAATCCAACTAATCTAATTAGTCCAAAGGAAAAGGATGCTTGGGCAGTTTATGGCGGAGAAGTCGAGAGTAAGTCCCTGGATGTATCCAATTCCGACGAATTAATCAAGATCAGTACTGTTGACAGTCTAGATATTCGAGGAAAAGGATTACGGTTAAAAGACGGATCGTATCCCTTTGCCATTCTGTTCAGAATGTATTACAAATTGATGCATACTAACCTTTCCCCAAAGGCTTTAGGTGTATCACCTAGAAACTACATCATGCTTATGGAAGTCAATCTTGAGAGATCCTCGATGACTATCCCAAGAAAGCTGAATTGGTGTGACCTCACAACAAACCCTGTTTGGACTATAGAGCAAGCTACCGCTCCAAGAAACAAACAGAGTAGTACAGCTCATATCACTGAGTTTGACGACGGACATGTCGAAGTTCAATTCCAAGAAGAACCAAGACGTCCTCGAATTCAAGAAATCATGGGCGGAAGATCCAACTTCTCTGAATTCCGCCCTAATACCAAAGAAAGACCCGTCATCAGGTCAAAATCAATGAGAATGTCAGTGGACTATGATCAGCCAATCCCTGACATCCAGTACGAAAAGTCTGAAGGATCTTTATCTCCTACTCAGACAGACATGGAACGAAAATCTGAACAATTGAAGGAAAAGAATGGGATCAATAAACCCAAATTTCTTTCAAAAGAAGAATACATCACTCTAGTCAAGCAAAAGCTTTTCCATGGGAGTGTTAGTGTTCTAAAGAAACCTTACAAATGGGTAACGGCTTCAGGGAAAGAAATACTTTCGGAGTACCCTCCAGAAAAAGAAGCCTATTTTCCTCATCCTCAAGCATCTTCGGTATCAATAGTTACCTCACCTTACAAAACTATTGACGAAGAAAAAACGAAAACTGTTGGAGTCAGAGAAATTAAGAACATCCAACAGCAACTCAATTATTCAAACAAAGTCCTCACAACTTTGACGAAATCAATAAAAGATCTAAAGCCAGGAAAGGAGAAGTCTCTTGCTCCGCCAAATAGGCCAGGTCTTCCAAAGGCCGATCCTGATCGACCAATAGTGCAACCCAACACTTTAGTAAAAATAAAAGGTTTTGGTGACAGCACTGAAGATCTTCTAAGTGAGCTGGGCAAAAAGCTATCAAAGCTCAATGCAGAAGAGGAAGACGTTGTCGAATCATCAAAGAAAAAGATAGCCTCCTATGTAGGCTTGGCAACCTCGAAAACAAATATTGGTAATCTCAACACGATTGAGAAAGCTCCTTCAAACCTTCTTCCTGTCAGAAATTTTAATGTCGACATGAAGAATCACTACAAGTGA 3945 41.95 MDQVDQIEEGSSRLLGGHSVAGSSNDYRWVDGSEVDSESPPWSLLEERESGEGYGSVRRRLVKKPKRVDSFDVEAMEIADTNYHHLKDVSTWQTLAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVVRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPDAAARIFYDSVPAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFQRTTDIANAYGYVPSSSFFLSYSIHLLCIFTGADCCIIICNQPTLLIAITSIAEVGVMLVSTVLVTLVMLLIWQTNLFLALCFPLVFGSVEFIYLSAVLSKISEGGWLPLAFAFIFLSVMYTWNYGSVLKYQSEVREKISIDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKEAQDLALESNLNVLEFDNISERPRNSPTLGVVDVNELRIPLMEEARTMSSDEGFGAPLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMDITTNPTNLISPKEKDAWAVYGGEVESKSLDVSNSDELIKISTVDSLDIRGKGLRLKDGSYPFAILFRMYYKLMHTNLSPKALGVSPRNYIMLMEVNLERSSMTIPRKLNWCDLTTNPVWTIEQATAPRNKQSSTAHITEFDDGHVEVQFQEEPRRPRIQEIMGGRSNFSEFRPNTKERPVIRSKSMRMSVDYDQPIPDIQYEKSEGSLSPTQTDMERKSEQLKEKNGINKPKFLSKEEYITLVKQKLFHGSVSVLKKPYKWVTASGKEILSEYPPEKEAYFPHPQASSVSIVTSPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLTKSIKDLKPGKEKSLAPPNRPGLPKADPDRPIVQPNTLVKIKGFGDSTEDLLSELGKKLSKLNAEEEDVVESSKKKIASYVGLATSKTNIGNLNTIEKAPSNLLPVRNFNVDMKNHYK 1314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 47494113 47503848 - Maker00039436 Lcy10g2390 645901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g2390 1314 MobiDBLite consensus disorder prediction 1 47 - -
Lcy10g2390 1314 MobiDBLite consensus disorder prediction 1203 1228 - -
Lcy10g2390 1314 Pfam K+ potassium transporter integral membrane domain 507 616 IPR053951 -
Lcy10g2390 1314 Pfam K+ potassium transporter integral membrane domain 98 499 IPR053951 -
Lcy10g2390 1314 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 80 866 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy10g2390 1314 Pfam K+ potassium transporter C-terminal domain 628 865 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0616 Lcy-Chr10:17302694 Lcy10g2390 Lcy-Chr10:47494113 7.38E-87 dispersed
Lcy10g1936 Lcy-Chr10:43445714 Lcy10g2390 Lcy-Chr10:47494113 2.85E-209 dispersed
Lcy10g2390 Lcy-Chr10:47494113 Lcy6g0363 Lcy-Chr6:3339127 8.67E-258 dispersed
Lcy10g2390 Lcy-Chr10:47494113 Lcy11g0921 Lcy-Chr11:27668715 8.51E-225 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g2390 K03549 - csv:101202804 1420.22