Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0029 | GGATGTGATGCGTCGGTGCTGCTGGATGACACGTCCAACTTCACAGGGGAAAAGACGGCAATCCCAAATAAAGATTCGCTGAGAGGTTTCGAAGTGATCGACAGTATCAAAACACTGGTGGAGGCGAGCTGCCCTTCTGTGGTTTCTTGCGCTGATATTCTCTCCATTGCAGCCCGGGACTCGGTGGTTGCAGTAAGCGCTGCTGCTGCTGCTTCTGCTTCTGCTTCTGCTTCTTCACTTGGTGGGCCTTCGTGGGTTGTTGGGCTTGGCAGGAGAGACTCGACCACAGCCAGCTTCGACACCGCCAACAATGACCTTCCATCTCCCTTCCTCGACCTCCCCGACCTCGTCTCTGCCTTCTCCAACAAAGGCTTCAACACCAAAGAATTGGTCGCCCTCTCCGGATCTCACACAATAGGCCAAGCCAGGTGCGCAATGTTCCGAGTAAGGGCCCATAACGAAACCAACATCGATTCGGAGTTGGCGGCTTCTTTAAGATCCAACTGCCCTCTGTCCGGCGACGACGACAAGCTTTCATCTTTGGACGTCGACACCCCTTCCAACTTCGACAACGCTTATTTCAAGAACTTGGTCCAGAACAAAGGGGTTCTTCATTCCGACCAAGCCCTCTTCAACAACGCCTCTGCCGACTCTCATGTCACCTCTTACTCCTCCGACTCTTCTGCTTTCTTCTCCGACTTCGCCGCCGCCATGGTTAAGATGTCTAACCTCAGCCCACTCACCGGAACTACCGGTCAGATTCGCTCCGACTGCCGCAAAATCAATTGA | 789 | 53.74 | GCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDSIKTLVEASCPSVVSCADILSIAARDSVVAVSAAAAASASASASSLGGPSWVVGLGRRDSTTASFDTANNDLPSPFLDLPDLVSAFSNKGFNTKELVALSGSHTIGQARCAMFRVRAHNETNIDSELAASLRSNCPLSGDDDKLSSLDVDTPSNFDNAYFKNLVQNKGVLHSDQALFNNASADSHVTSYSSDSSAFFSDFAAAMVKMSNLSPLTGTTGQIRSDCRKIN | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 297195 | 298148 | - | Maker00005969 | Lcy11g0029 | 645930 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0029 | 262 | PANTHER | PEROXIDASE 72-RELATED | 1 | 261 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | FunFam | Peroxidase | 107 | 241 | - | - | |
Lcy11g0029 | 262 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 262 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 129 | 139 | IPR019793 | - | |
Lcy11g0029 | 262 | CDD | secretory_peroxidase | 1 | 261 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Plant peroxidase signature | 236 | 249 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Plant peroxidase signature | 28 | 41 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Plant peroxidase signature | 47 | 57 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Plant peroxidase signature | 180 | 195 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Plant peroxidase signature | 196 | 213 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | Gene3D | Peroxidase, domain 2 | 107 | 241 | - | - | |
Lcy11g0029 | 262 | SUPERFAMILY | Heme-dependent peroxidases | 1 | 262 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Haem peroxidase superfamily signature | 48 | 65 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | PRINTS | Haem peroxidase superfamily signature | 129 | 144 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy11g0029 | 262 | Gene3D | - | 1 | 259 | - | - | |
Lcy11g0029 | 262 | Pfam | Peroxidase | 1 | 226 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g0029 | Lcy-Chr11:297195 | Lcy7g1485 | Lcy-Chr7:25733852 | 3.82E-90 | dispersed | |
Lcy11g0028 | Lcy-Chr11:282475 | Lcy11g0029 | Lcy-Chr11:297195 | 1.41E-83 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0029 | K00430 | - | csv:101221157 | 362.844 |