Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0045 ATGGTTGACAACGGCGAGGAGAAGCTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGTCGTAACGAGTCCATGGCCGATGATATTTTGGAGATCTTTTCCAATTTCGATGCTAGGTTTTCCCTTGATAAGTTGTCTGACAAAGCCGATGAGCTTGATCCCAGAGCCCCCGCCGCTTTGCAGCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAGTACTTGGCCGCCGACCATCCGATTTGGGCGGATTCCGCCGATTCCTCTGCTTTTCTTGATGCTATTGATGAGTTGATGGCCACCATTAGGGACTGGTCGCCGATGGCTAGGGATAAGTCTGTTGGCACCTACCTCGCTCGCGCCGACGATCTGATGCAGCAGGCTATGTTCCGCGTCGAGGAAGAGTTCCGGTCGTTGATGGAGCGCGGAGGTGAGTCCTTTGAACTGACTCGCCATTTCAGGAACGGTGAGTCAACGGGCGATTATTGCTTCGATTCTGAGGAAGATGAGGAAACTGCGGAGGGAATTCTTGGCGACGGGCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTAATCGATGCGCTTCCGTCGGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGCATGGTGGCGGCTGGGTTCGAGAAGGAGTGTTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTCAGCATGGATGAAGTTCAAAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCGCCGCTGACCTCTCTTTCATGGAGGTCTGCCGAGGATCGACGATTCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGATCTCGCGCACCAGAACGACTGTTCAAAATTCTCGACATGTTCGAGACCTTGAGAGACTTGATGCCGGAGTTTGATTCCGTATTTTCAGACCAGTACTGCCTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGATTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGCCGTGATCCAGCTAAAACTCCAGTGCCGGGCGGCGGCCTTCATCCAATTACTCGATATGTGATGAATTACCTTAAAGCAGCCTGTAAATCGCGGCAGACTTTGGAGCAAGTTTTTGAAGAAGCCGCTCTTCCCTCTAAGGATTACACCAAGCTCGAGGACAGAGCAGCAGCATCGTCTTCGTTATCAGTTCAAATGGATTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCGAAGTCGAAGATATACAAGGATCTTTCCTTAGGCTCTGTGTTTCTGATGAACAATGGCCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGCGACAATTGGATTCGAAAACACATGGCTAAAAGTCAGCAATACCTCAAGAATTACCTGAAAAGCTCATGGAGCAAGGTGATCGGAGTATTGAAAATGGACAGTGGCTCTTTAGCTCCCGGTGTAATGAAAGAGAAGCTCAAATCATTCAATGTGCAGTTTGAAGAAATCTGCCAAACCCAATCTACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAACCCTGCTGCCGGCATATCAAAATTTCATCGGAAGGTACCAGAGTTTGCCAGAGCTGGCAAAGCGTACAGACCGGTATTTGAAGCTCACGGCGGAGGATGTGGAGGCTCGGATCACCGAGCTCTTCGAAGGAGGCGGCGGCTCAGGCGGCGGAAGGCGGTAA 1902 50.42 MVDNGEEKLLAMARHIAKTMGRNESMADDILEIFSNFDARFSLDKLSDKADELDPRAPAALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMATIRDWSPMARDKSVGTYLARADDLMQQAMFRVEEEFRSLMERGGESFELTRHFRNGESTGDYCFDSEEDEETAEGILGDGLQIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSMDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQVFEEAALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLGSVFLMNNGRYIVQKVKDSELGSVLGDNWIRKHMAKSQQYLKNYLKSSWSKVIGVLKMDSGSLAPGVMKEKLKSFNVQFEEICQTQSTWVIFEHQLREEARISVAKTLLPAYQNFIGRYQSLPELAKRTDRYLKLTAEDVEARITELFEGGGGSGGGRR 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 447898 449799 - Maker00005912 Lcy11g0045 645946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0045 633 Gene3D Exocyst complex component Exo70 82 628 - -
Lcy11g0045 633 Pfam Exo70 exocyst complex subunit C-terminal 267 619 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lcy11g0045 633 SUPERFAMILY Cullin repeat-like 83 623 IPR016159 -
Lcy11g0045 633 FunFam Exocyst subunit Exo70 family protein 76 629 - -
Lcy11g0045 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 624 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Lcy11g0045 633 Pfam Exocyst complex component Exo70 N-terminal 86 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0045 Lcy-Chr11:447898 Lcy5g2120 Lcy-Chr5:44244463 4.01E-117 dispersed
Lcy11g0045 Lcy-Chr11:447898 Lcy2g0063 Lcy-Chr2:462483 6.48E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0045 K07195 - csv:101204511 1133.24