Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0060 ATGCTTAAGTCAGTAATCGGAGGGAATATGAGCAAAACTAGAGAGCAAAAGGAAGAGAAGAGTGACTGGGGGCACCGGTGGATCGAACGGAAGCGGAAGAACTCGGCCCGCGCAGGCGGGCCGAGTGGTCGGCCTCGGCCTCGGCCCAAGGCCGAGGCCGAGCAGGGGGTCGGGCCAAAAGCCCGATCCCTTCGGCTTTGGCTCGACCCTCTGTCCTGTTCTTCCTCCGGATCCCGTTTTCTGGCTGCCTCTTTAGGCTGGTATCGCGCTGTCTTCGCCCGCTTCTTGCATATCGGACTATGGTACCCACTTGGAAAAACTATGGCAGAAAAGGCAGCTTGGGATTTTTCTAAGGAGAAAGGACTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGATTCCTCCCAGAATTAATGCCAGCGTGTTAATTATTTTAAGACTTCTTCAGGGAATAGTGCACTTTAAAGACGTTGCATTGGCTCACATTTTGGTGTATGAAAACAAATCAGCTAAAGGAAGGCACTTGTGTGTTGAGAGCATATCTCCTTACTCTGAATATGTCACAAAGGTTGCTCAACTCTACCCTCAATATAAGGTGCCCAGATCAACAGAAGATGCAGAATTTGGCTCGGTGAAAGCAAGAGATGGAGCTAAAAAGTTGATGGACCTTGGCTTGAAATTCATCCCAATGGAGGAAACCATCAAGGATGCTGTTGAAGAATTAAAGAACAAGGGATTCATTTCCTAA 759 49.14 MLKSVIGGNMSKTREQKEEKSDWGHRWIERKRKNSARAGGPSGRPRPRPKAEAEQGVGPKARSLRLWLDPLSCSSSGSRFLAASLGWYRAVFARFLHIGLWYPLGKTMAEKAAWDFSKEKGLDVVVINPGTVMGPVIPPRINASVLIILRLLQGIVHFKDVALAHILVYENKSAKGRHLCVESISPYSEYVTKVAQLYPQYKVPRSTEDAEFGSVKARDGAKKLMDLGLKFIPMEETIKDAVEELKNKGFIS 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 589499 592708 - Maker00005909 Lcy11g0060 645961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0060 252 Gene3D - 87 252 - -
Lcy11g0060 252 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 95 245 IPR036291 -
Lcy11g0060 252 MobiDBLite consensus disorder prediction 12 36 - -
Lcy11g0060 252 MobiDBLite consensus disorder prediction 1 57 - -
Lcy11g0060 252 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 97 243 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0060 Lcy-Chr11:589499 Lcy6g1116 Lcy-Chr6:12641990 5.44E-42 dispersed
Lcy11g0059 Lcy-Chr11:580076 Lcy11g0060 Lcy-Chr11:589499 1.03E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0060 - - - 0.0