Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0062 ATGTCGACCGTCTGCGTCACCGGCGGCAGCGGCTGCATCGGATCCTGGCTCGTCCGCCTCCTCCTCCTCCGTGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAAGGACGAAAAGGAAACGAAGCATCTGGAGGATTTAGAAGGAGCGGCTAATCGTCTTCGTCTCTTCCAAATCGATCTCCTCGATTATGTCTCCATCGTCTCCGCCGTCAGCGGCTGCGCCGGCGTCTTCCACCTGGCGTCTCCGTGCACCGTCGATCGTGTTGCAGATCCTGAGAAGGAGCTACTGGAGCCGGCGATCAGAGGAACGATCAACGTCCTGACGGCGGCTAAGGAGGCTGGAGTTCAACGCGTAGTGGTAACTTCATCGGTCACCGCCATTGTTCTGAACCCTCGCTGGCCGGCGGATGTTCCAATCAATGAAGATTGCTGGAGCGATGTCGATTACTGCAGGGAAAATGGCATGTTAGCTATGCTTGAGTTTGATCTTACATAA 498 56.02 MSTVCVTGGSGCIGSWLVRLLLLRGYSVHATVQNLKDEKETKHLEDLEGAANRLRLFQIDLLDYVSIVSAVSGCAGVFHLASPCTVDRVADPEKELLEPAIRGTINVLTAAKEAGVQRVVVTSSVTAIVLNPRWPADVPINEDCWSDVDYCRENGMLAMLEFDLT 165
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 601583 602535 - Maker00005985 Lcy11g0062 645963
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0062 165 Gene3D - 1 160 - -
Lcy11g0062 165 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 154 IPR050425 GO:0016616(PANTHER)
Lcy11g0062 165 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 154 IPR036291 -
Lcy11g0062 165 Pfam NAD dependent epimerase/dehydratase family 4 127 IPR001509 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0062 Lcy-Chr11:601583 Lcy6g1116 Lcy-Chr6:12641990 2.75E-44 dispersed
Lcy11g0059 Lcy-Chr11:580076 Lcy11g0062 Lcy-Chr11:601583 2.45E-77 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0062 - - - 0.0