Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy11g0110 | ATGGCCAACGACGTCGTTTTTCTTTTTCTCCTTCTCATTTTTGCTTATTTGATTTGGTTTCATTTCCTCGCCCGGAAGCTGACCGGTCCAACAGTCTGGCCGCTCATCGGCAGCCTACCGGCTCTCATCTCGAACCGCCGGAGACTCCACGACTGGATGGCCGGAAACCTCCGCTCCACAGGCGGCGCCGCCACCTACCAAACCTGCACGGTGGCGCTTCCTTTCATCGCCAAAAGACAAGGGTTCTACACCGTCACGTGCCACCCGAGGAACATCGAGCACGTGCTCCGAACCCGGTTCGAGAATTACCCGAAAGGACCGGACTGGCAGGCGGCTTTTCACGATCTGTTGGGGCAAGGGATTTTCAACAGCGACGGCGAGATTTGGCTGATTCAGCGGAAGACGGCGGCGCTGGAGTTCACGACGAGGACGCTCCGGCAGGCGATGGACCGGTGGGTGAACCGGACGATAAGGACGCGACTGTGGTGCATTTTGGAGAAGGCGGCGGAGTACAAAACGGCGGTGGATTTGCAGGATTTGCTGCTCCGATTGACTTTTGATAACATTTGTGGGCTGACTTTCGGGAAAGATCCTCAAACTTTGTCGCCGGAATTGCCTGCAAATCCCTTCGCTCTGGCGTTCGATACCGCCACTGAGGCCACTCTTCAGCGCCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGCTTCTGGGCATTGGAATGGAAAGCGAGTTAAAGAAGAGTCTGAAAATAGTAGAAGAATACATAAACGACGCCGTTGCAGCCCGTAAAGAATCTCCCTCCGACGACTTATTATCCCGCTTCATGAAGAAACGCGGCGGCGACGGCGACGGCGACGGAAACCGCTTCTCCGCCGCCGTGCTCCACCGCATCGCCTTAAACTTCGTCCTCGCCGGCCGGGACACGTCCTCCGTGGCGCTGACGTGGTTCTTCTGGCTCGTAATGAACCACCCGCACGTGGAGGCCAAGATCCTCGCCGAAATCTCAAGGGTCCTCCGCCAGACACGTGGCGACGATCCGGGCCGTTGGATCGAAGAGCCGTTGGTGTTCGACGAGGCCGATAAATTGGTGTATTTGAAAGCCGCGTTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCGCAGGATTTCAAATACGTGGTGGCTGATGACGTGTTGCCAGATGGGACGTTCGTGCCGGCCGGTTCGACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGACTGTGCGGAGTTTAAACCGGACCGGTGGCTGTCGCCGGCCGGAGACCGGTTCGAGGGGCCGAAGGATGCGTACAAATTCGTGGCGTTTAACGCCGGACCGAGGACTTGTTTGGGGAAGGATTTGGCGTATTTGCAAATGAAGTCCGTCGCCTCCGCCGTGCTCCTCCGGTACCGGCTGGCGCCGGTTCCCGGTCACCGGGTCGAACAAAAAATGTCGCTTACTCTGTTCATGAAGAATGGGCTTCGTGTTTACTTGCATCCTCGCCGGCTCGGTTAG | 1545 | 57.02 | MANDVVFLFLLLIFAYLIWFHFLARKLTGPTVWPLIGSLPALISNRRRLHDWMAGNLRSTGGAATYQTCTVALPFIAKRQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRLEKLLGIGMESELKKSLKIVEEYINDAVAARKESPSDDLLSRFMKKRGGDGDGDGNRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEAKILAEISRVLRQTRGDDPGRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCAEFKPDRWLSPAGDRFEGPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1201933 | 1204769 | - | Maker00005762 | Lcy11g0110 | 646011 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy11g0110 | 514 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PANTHER | CYTOCHROME P450 | 17 | 504 | - | - | |
| Lcy11g0110 | 514 | SUPERFAMILY | Cytochrome P450 | 19 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | FunFam | Cytochrome P450 | 21 | 513 | - | - | |
| Lcy11g0110 | 514 | Pfam | Cytochrome P450 | 84 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | Gene3D | Cytochrome P450 | 23 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g0110 | 514 | CDD | CYP86A | 69 | 504 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy11g0110 | Lcy-Chr11:1201933 | Lcy13g0700 | Lcy-Chr13:10104949 | 6.12E-238 | dispersed | |
| Lcy11g0110 | Lcy-Chr11:1201933 | Lcy12g1638 | Lcy-Chr12:36741963 | 3.79E-246 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy11g0110 | K15401 | - | csv:101214516 | 956.051 |