Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0164 ATGCTTCCTCTTCTTCTTTTCTTTCTTCTCTTTCTCTTTCTCCTTTGCCTTCAATGGCGCCACCCCAAACACAAACTCCTCCCTCCCGGCTCGATGGGCTGGCCTTACATCGGCGAAACCTTCAAACTCTACACTCAAAACCCAAACACCTTCTTCTCCATTAGGCGAAAAAGGTATGGAGATGTGTTTAAGACACATATATTGGGATGTCCATGTGTGATGATTTCAAGCCCTGAGGCTGCGAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCGCCAAGCAAAGAGAGAATGATTGGCCCTCAAGCTTTGTTCTTCCATCAAGGGCCTTACCATTCTCGCCTTAAGAAGCTCATCCAAGCTTCCTTTTTGCCCTCTGCTATCAAAGCCTCTGTCTCTCAGATTGAGAACATTGTGCTCCACCTTCTCCCCTCTTGGAATGACTCCCAAATCAACACCTTGCAACAAATGAAAAGGGTATCTCAAAAATTTGATTTTTTTTAA 519 44.89 MLPLLLFFLLFLFLLCLQWRHPKHKLLPPGSMGWPYIGETFKLYTQNPNTFFSIRRKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSRLKKLIQASFLPSAIKASVSQIENIVLHLLPSWNDSQINTLQQMKRVSQKFDFF 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1797533 1806208 - Maker00005916 Lcy11g0164 646065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0164 172 PANTHER CYTOCHROME P450 26 27 169 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lcy11g0164 172 Gene3D Cytochrome P450 19 169 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g0164 172 Pfam Cytochrome P450 28 150 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g0164 172 SUPERFAMILY Cytochrome P450 20 153 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0164 Lcy-Chr11:1797533 Lcy13g2072 Lcy-Chr13:39626229 6.11E-61 dispersed
Lcy11g0164 Lcy-Chr11:1797533 Lcy13g0159 Lcy-Chr13:1628527 4.68E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0164 K09843 - csv:101216531 301.212