Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0201 ATGGCGAAAATTCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGGCCGTCTCCACACTCTTCCTCTCCGGAGACACGTCGCCACCAGAGTCAATTCCAGCTTCCATGAACTTCCCCCCATCCATACCTTTGATTACCCCATCAATTTTGAAGCAATTGTTAGCAGAGCCGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCAGTGGATTCGACTGTTTCAGGTGGCGGGGCATCGAGTTCCGCAGATACTGCGGTGCAGAAGAATGGTGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTCGTTCTTAAAGTATTGAAGGATGGACTGGCGGCTGTGCATGTGCCATATGCATATGGATTTGCAATTATTTTACTTACTGTTATTGTTAAAGTTGCAACTTTTCCTCTTACCAAACAACAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCAAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGGCTTTATAGACAAGCTGGAGTGAATCCTTTGGCAGGGTGCTTACCAACTTTGGCCACCATACCAGTTTGGATTGGACTATATCAAGCCCTTTCTAACGTGGCAAATGAGGGATTATTCACTGAAGGTTTCTTTTGGATTCCCTCCCTTGGTGGACCGACTACTATTGCTGCTCGACAAAGTGGAGCTGGAATCTCTTGGTTGTTTCCTTTTGTGAATCTACCCTTGGCCTTGGCTTTAACTGTAGTTGTACATAGCTCTATCAAACTTGGCCCATTTCCCATATTTCCTCTGCCTCTAATATTTTGCCTCACCCTTTTGAGCAGCTCTCAGTTTGTGGGGCTGATTTCACTTTCATCCGTCCAAGGACTGGGGACATTTGGTTTGGGATTTTTCCATGGGTTGTGTTAG 963 45.69 MAKILISSSPFVGSSLPSLSRHGRLHTLPLRRHVATRVNSSFHELPPIHTFDYPINFEAIVSRAEGLLYTLADAAVAVDSTVSGGGASSSADTAVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYAYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVNLPLALALTVVVHSSIKLGPFPIFPLPLIFCLTLLSSSQFVGLISLSSVQGLGTFGLGFFHGLC 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2407301 2416786 + Maker00005987 Lcy11g0201 646102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0201 320 Pfam 60Kd inner membrane protein 129 274 IPR028055 -
Lcy11g0201 320 CDD 5TM_YidC_Alb3 130 240 IPR047196 -
Lcy11g0201 320 PANTHER OXA1 35 293 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(InterPro)|GO:0032977(PANTHER)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Lcy11g0201 320 NCBIfam membrane protein insertase YidC 129 272 IPR028055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0201 Lcy-Chr11:2407301 Lcy13g1727 Lcy-Chr13:36240089 6.57E-58 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0201 K03217 - csv:101217620 419.083