Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0298 ATGGCGGCCGCAGCCCTGGATCCTTCGTCGCTGCAATTCACGCCGACTTGGGCCGTCGCTGCTGTTTGCTTCTTCTTCATCTCGCTCTCTCTGTTCCTCGAGCATTTGATTCATCTTATCTCCAATTGGCTGAGGCGGAATAGGAAAACGGCATTGTTCGAGGCGGTTGAGAAGCTAAAATCAGTGTTGATGCTGCTAGGGTTCATGTCGCTAACTCTGACGGTAACGCAACAGCCAGTATCGAAGATTTGCATTCCGAACAACGTAGCGTATACGATGCTTCCGTGCCAGAAAGAAATACAGATCACAGCGAATAAGAATTTGGAGATGGAGAATTTTCGATCGGCCTCGTCGTCGAATCGGTCGTTTTCATCAGTGCCGGAAATTTTTGTGAGCCTCGCGGCGGGAGGTGAAGGGAGTAGCGGTGGTGGTGGTGATTCTTCTTCTTCGTCTTCTTCGGATCACTGCACTGCGAAGGGGAAGACTTCGATGATATCGCAAGGAGGAATGAATCAACTGAACAATTTCATATTCGTTTTGGCTGTTATGCAGATCGTTTACAGTGTCCTCACCATGGCTTTGGGAAAGGCTAAGATGAGACGCTGGAAAGCTTGGGAGGAAGAAACTCATACGTTGGATTATCAAGTGGCTAATGATCCAAATCGTTTTAGATTTACAAGGCAGACGACTTTCGGACGTCGGCACATCAGTTCTTGTGCCACCCCACCATTGCTTCTTTGGACCAAATGCTTCTTCAGACAGTTCTTTCGTTCTGTGGCTAAAGTTGACTACTTGACCCTTCGCCATGGTTTCATCTTGACTCATGTACCTGGAAATACTTCCTTTAACTTCCAAAAGTACATTGAGAGATCACTGCACGATGACTTCAAAGTCGTAGTTGGCATCAGTCCTTTCATGTGGGTCATAGTGGTTATCTTCATTCTGGTAGATGTGCATGGTTGGAATGCATATCTCTGGGTTTCTTTCCTTCCACTAATTATAGTGTTAGCTCTTGGAACCAAGCTTGAAGTAATAGTAGCAAGGCTTGCTCTTGAGCTTCAAAACAAGACTGATGTGATCAAAGGAGCTCCAATGGTGCAACCAAGTGATGATCTTTTCTGGTTCAATCACCCCAAATTTGTTCTCACCCTTCTTCATTTCACTTTGTTTATGAATGCCTTTGAACTTTCGTTCTTCATTTGGGTTACGCTACAATATGGGATAAAATCTTGCTATCATGAAAAGGTGGCGGTCATCATTATAAGAGTAGTCTTGGCGGTCACAGTCCAAGTGTTGTGCAGCTACATTACTCTACCACTCTATGCTCTTGTCACGCAGATGGGGTCACAGTTCAAAGCTGCAGCATTAGAAGAACACACAGCCAAAGCCATAAGGCAATGGCACAAAGATGTAAAGCAAAAGAGAAAAAAGAATAACCACCACCACGACCTCGACTCGAGCCAACACCAGGAAGGCTCGTCTCACTCCGTCGCCGAGCGGCAGTCGTCGACAGTTTTCGAGAGCAGCAGCAGAACCCTAAGCTCCCAAGAGATGAGCTCTTCCCATCACCGAGCTCCCACTTTTTCTGAGATCAACAGTCTTGGTATTGAGTGTAATGAGATTGTTGAACTCACAGAAACTGTGGTGAAGGATGAACCTGTAGTTTCAGGTAAGTCAATGGGAATAAAAATAGGAGAGATTAGTGAAATTCATGAAGGAGAAACCTTAACTGCTCAAACTGAAAGACAGATTTCATAG 1758 45.39 MAAAALDPSSLQFTPTWAVAAVCFFFISLSLFLEHLIHLISNWLRRNRKTALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNNVAYTMLPCQKEIQITANKNLEMENFRSASSSNRSFSSVPEIFVSLAAGGEGSSGGGGDSSSSSSSDHCTAKGKTSMISQGGMNQLNNFIFVLAVMQIVYSVLTMALGKAKMRRWKAWEEETHTLDYQVANDPNRFRFTRQTTFGRRHISSCATPPLLLWTKCFFRQFFRSVAKVDYLTLRHGFILTHVPGNTSFNFQKYIERSLHDDFKVVVGISPFMWVIVVIFILVDVHGWNAYLWVSFLPLIIVLALGTKLEVIVARLALELQNKTDVIKGAPMVQPSDDLFWFNHPKFVLTLLHFTLFMNAFELSFFIWVTLQYGIKSCYHEKVAVIIIRVVLAVTVQVLCSYITLPLYALVTQMGSQFKAAALEEHTAKAIRQWHKDVKQKRKKNNHHHDLDSSQHQEGSSHSVAERQSSTVFESSSRTLSSQEMSSSHHRAPTFSEINSLGIECNEIVELTETVVKDEPVVSGKSMGIKIGEISEIHEGETLTAQTERQIS 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4832009 4843091 + Maker00032632 Lcy11g0298 646199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0298 585 MobiDBLite consensus disorder prediction 142 161 - -
Lcy11g0298 585 MobiDBLite consensus disorder prediction 490 526 - -
Lcy11g0298 585 MobiDBLite consensus disorder prediction 468 526 - -
Lcy11g0298 585 PANTHER MLO-LIKE PROTEIN 1 8 521 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy11g0298 585 MobiDBLite consensus disorder prediction 137 161 - -
Lcy11g0298 585 Pfam Mlo family 10 496 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0298 Lcy-Chr11:4832009 Lcy13g2270 Lcy-Chr13:41607802 9.06E-134 dispersed
Lcy11g0297 Lcy-Chr11:4760616 Lcy11g0298 Lcy-Chr11:4832009 2.69E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0298 K08472 - csv:101221560 928.702