Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0328 ATGGGTGCGGAGACAGTCACCACGAGCGGAGCCGGCGGCGGCCGGAGCTTCGACGCGGTCCGATTCGCGGTGCAGGTGATAAAAGGGCGGTGGTTCACGGTGTTCGCCACATTTCTGATCATGGCCGGCGCCGGTGCGACGTATCTCTTCGGTGTGTACTCGAAACGGATCAAAGCGACGCTTGGTTACGACCAAACCACTCTGAATCTGATGGGATTTTCCAAAGATTTCGGTGCCAACGTCGGTGTGCTGTCCGGTTTAGTGGCGGAGGTGACACCGACTTGGTTCGTCCTCCTCCTCGGATCCGCCTTGAACTTCGCCGGATACTTCATGATTTGGTTGGCCGTCACCGGCCGAATCGCGAAGCCCACAGTCTGGCAGATGTGTCTTTACATCTGTATCGGTGCTAATTCCCAAAATTTCGCAAACACTGGCGCTTTGGTCACTTGCATCCAGAATTTCCCCGAGAGCCGCGGGGCTATGTTGGGCCTTTTGAAGGGCTTCACAGGGCTGAGCGGTGCGATCCTGACACAGATTTACTTGGCCGTCTACGGCGACGATGCGACGTCGTTGATCCTTCTAATTGCGTGGCTCCCGGCGGCGCTCTCCGTCGTGTTTGTTTTCACGATTCGAAGGCTGAGGGCGGCGAGACAGCCGAATGAGAGAAGGGTTTTCTTCCATTTCCTCTATGTCTCTATTGGGCTGGCGCTTTTCATCATGCTTATGCTTATCGTTCAGAAGCAAGTGGTATTCAATCATACCGCTTATGCCGCAAGTGCCACAGTCATTTGCGTGATCGTTTTCCTTCCTCTGTTGATTGTCATTAGAGAAGAACTTAAACTCTGGAACCCCTCAATTCCCAACGAAAACCCGCAACCACAATCTCAGCCAAAACAAATCGAACCCAAAATTGAGGAATCGATGGAAATCAAGGAGACTCCAATACCGGAGTCTTGTTTCTCCAACATATGCGATAAACCAGTAAGAGGAGACGACTACACAATCCTACAAGCACTTCTCAGCATCGACATGCTGGTTCTATTCCTGGCAACATTCTGTGGGCTCGGCACAAGCTTAACCGCCGTAGACAATTTGGGGCAAATTGGCGAATCGCTCGGCTACCCAACAAAGACAGTGAGCTCATTCATCTCACTGATGAGCATTTGGAATTACTTTGGCAGAGTGTTCTCCGGGTTCGTCTCCGAGAGCCTTCTCGCAAGATTCAAATTCCCAAGACCCTTAATGATGACGTTAGTCCTTCTCCTCTCTTGCGTGGGTCAACTCCTGATCGCCTACCCAGCGCCAGGCTCCATCTACATCGCGTCGATCATCATCGGATTCTCCTTCGGCGCACAGCTTCCTCTGCTTTTCGCCATAATCTCGGAGCTGTTCGGGCTGAAATACTTCTCCACTCTGTTCAATTGCGGGCAGCTGGCGAGCCCGTTGGGGTCGTTCATTCTGAATGTGAAGGTGGCAGGAAAGATGTACGACCATGAGGCTTTAAAGCAGCTGAAGGAGAAGGGGCTGGACAGGTCGGCGGTGAAGGAATTGACTTGCATTGGAAAGCAGTGTTTCAGGAAGTCGTTTACGCTAATGGCGGGCGTTACGTTTGCTGGGGCAATGGTTTCGCTGATTCTGGTGGTGAGGACGAGGGAGTTTTACAGAGGGGACATATACAAGAAGTTTAGGGAGGAAGTGGAAGAGCCCCAAGCGCAAGGGGGAGAGATTGCTGCTGATCCTGCTCGTGAATCAAAGTGA 1758 52.22 MGAETVTTSGAGGGRSFDAVRFAVQVIKGRWFTVFATFLIMAGAGATYLFGVYSKRIKATLGYDQTTLNLMGFSKDFGANVGVLSGLVAEVTPTWFVLLLGSALNFAGYFMIWLAVTGRIAKPTVWQMCLYICIGANSQNFANTGALVTCIQNFPESRGAMLGLLKGFTGLSGAILTQIYLAVYGDDATSLILLIAWLPAALSVVFVFTIRRLRAARQPNERRVFFHFLYVSIGLALFIMLMLIVQKQVVFNHTAYAASATVICVIVFLPLLIVIREELKLWNPSIPNENPQPQSQPKQIEPKIEESMEIKETPIPESCFSNICDKPVRGDDYTILQALLSIDMLVLFLATFCGLGTSLTAVDNLGQIGESLGYPTKTVSSFISLMSIWNYFGRVFSGFVSESLLARFKFPRPLMMTLVLLLSCVGQLLIAYPAPGSIYIASIIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQLASPLGSFILNVKVAGKMYDHEALKQLKEKGLDRSAVKELTCIGKQCFRKSFTLMAGVTFAGAMVSLILVVRTREFYRGDIYKKFREEVEEPQAQGGEIAADPARESK 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5523107 5524864 + Maker00032780 Lcy11g0328 646229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0328 585 CDD MFS_Mch1p_like 29 540 - -
Lcy11g0328 585 SUPERFAMILY MFS general substrate transporter 31 555 IPR036259 -
Lcy11g0328 585 Gene3D MFS general substrate transporter like domains 339 554 IPR036259 -
Lcy11g0328 585 FunFam Nodulin family protein 335 556 - -
Lcy11g0328 585 Pfam Nodulin-like 30 275 IPR010658 -
Lcy11g0328 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 563 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0328 Lcy-Chr11:5523107 Lcy7g0626 Lcy-Chr7:5718486 2.77E-232 dispersed
Lcy11g0328 Lcy-Chr11:5523107 Lcy11g0329 Lcy-Chr11:5535934 4.05E-190 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0328 - - - 0.0