Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0329 ATGGGCGAGAACAACCATGCAGTAGAAAATTGGCGGTTCGTGAAACAAGTCGTTCAAGGACGATGGTTTTCGGTATTCGCCTCGTTTCTGATCATGCTCGGCTGTGGTTCCACTTACTTATTCGGAACATACTCCAAATTGATGAAGACTCGATTCGATTACGATCAAACCCAAATCAACACGTTGGGATTTGCCAAAGATCTCGGCTCAAACCTTGGAGTTTTTGCCGGACTTCTGGCCGAGGTGGTTCCGTCGTGGGTCTTGTTCCTCATCGGCTCATCCGTTAACTTTCTTAGCTACTTCTTCATCTGGCTCTCTGTTACTGGCTACATCCAAAATCCCCGATTCTGGCTGATGTTCGTTTCCGTATGTATGTCTGCCAATGCACAGAACTTCCCCAACACTGCCATTATGGTCACCAACGTACGAAACTTCCCCGATCGACGAGGCATCATTTTGGGCCTTCTTAAGGGCTTTGTCGGCCTCGGTGGGGCCGTCCTAACCCAGGTATATTTCAGCATTTATGGCCATGCAAACCCAGCTGATCTCATCCTCCTTTTGTCCTGGCTTCCTTCTGTTGTGATTCTCCTCGTTTTTCTTTCGATTCGAACAATCAAAGCTCAAAAGCATCCACAGGAGCTCAAAGTGTTCTATCACTTGCTTTTTGTGTCCATAGCAATGGCAGTGTTCATCTTGTTTCTCACCTTAACACAAAAACATTCTGCCTTTTCTCACGCTGGCTATGTCGGGGGTGTTGTAGTCATCGTCGCCTTACTCTGTCTGCCTCTTCTCATTGCAATTAAAGAAGAATTGTTTCTCTTCAAACTCAACAAACAAACCGTGGATCCATCCGTCGCTATTGTAATTGCTGAAGACGAGAAAGCTACGGATGAGAAGATTTCAGAAGCTAATTCCCGGTCGTGGTTCTCAAATGTATTTAACAAACCGAAAAGAGGGGAGGATTTTAGCATCATGCAAGCTCTCTTCAGCTTAGACATGGCTCTTATTTTCGTAGCGGCAATTTCCGCTTGTGGTTCGTCTGTTGTCGCCATCGACAATCTTGGGCAGATCGCGGAATCACTTAAATACCCAGATCGTACTATAAGCATCTTCATTTCGTGGATTTCCATTTTCAATTTCTTCGGTCGGGTCTTCTCTGGTTTCATCTCGGAAACTCTTATGACCAAATACAAATTACCTCGTCCTCTCATGTTCGGCCTTACACATATCTTCATCTGCATTGGCCTATTCTCCATTGCCTTCCCATACACAAATTCAGTCTACACAGCTTCGTTGATCATTGGGTTTGGGTTTGGAGCCCAAGTTCCATTGCTGTTCACCTTAATCTCTGATCTCTTCGGGCTCAAACATTACTCGACGTTGCTCAACTGTGGGCAGATAGCAGTTCCATTGGGATCTTATATACTAAACGTGCATGTAGTGGGGAAGTTGTACGATCGGGAAGCCATTAAAGGCGGTAGTGTGAAGAATGGGAAGGGCCTAACGTGCACTGGAACCAATTGCTTTAGTGGGTCGTTCACAATTTTGGCCGCAGTGACTTTGTTTGGAGTGATGGCTTCGTTTGTGTTGGCTTACAGGACTCGGGACTTTTACAAAGGTGATACATACAAGAAATACAGAGATGATATGTGGATTACTCGACCAGATGTGGAATTGTATTCTTCCGATGATAAGAAGAACAGTGATCACAAAAAGAGCAATAATGATGGAAGCAAATAA 1740 44.89 MGENNHAVENWRFVKQVVQGRWFSVFASFLIMLGCGSTYLFGTYSKLMKTRFDYDQTQINTLGFAKDLGSNLGVFAGLLAEVVPSWVLFLIGSSVNFLSYFFIWLSVTGYIQNPRFWLMFVSVCMSANAQNFPNTAIMVTNVRNFPDRRGIILGLLKGFVGLGGAVLTQVYFSIYGHANPADLILLLSWLPSVVILLVFLSIRTIKAQKHPQELKVFYHLLFVSIAMAVFILFLTLTQKHSAFSHAGYVGGVVVIVALLCLPLLIAIKEELFLFKLNKQTVDPSVAIVIAEDEKATDEKISEANSRSWFSNVFNKPKRGEDFSIMQALFSLDMALIFVAAISACGSSVVAIDNLGQIAESLKYPDRTISIFISWISIFNFFGRVFSGFISETLMTKYKLPRPLMFGLTHIFICIGLFSIAFPYTNSVYTASLIIGFGFGAQVPLLFTLISDLFGLKHYSTLLNCGQIAVPLGSYILNVHVVGKLYDREAIKGGSVKNGKGLTCTGTNCFSGSFTILAAVTLFGVMASFVLAYRTRDFYKGDTYKKYRDDMWITRPDVELYSSDDKKNSDHKKSNNDGSK 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5535934 5537673 + Maker00032755 Lcy11g0329 646230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0329 579 Gene3D MFS general substrate transporter like domains 322 574 IPR036259 -
Lcy11g0329 579 MobiDBLite consensus disorder prediction 560 579 - -
Lcy11g0329 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 542 - GO:0016020(PANTHER)
Lcy11g0329 579 Gene3D MFS general substrate transporter like domains 15 215 IPR036259 -
Lcy11g0329 579 Pfam Nodulin-like 21 267 IPR010658 -
Lcy11g0329 579 SUPERFAMILY MFS general substrate transporter 22 538 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0329 Lcy-Chr11:5535934 Lcy11g0333 Lcy-Chr11:5638652 7.91E-273 dispersed
Lcy11g0328 Lcy-Chr11:5523107 Lcy11g0329 Lcy-Chr11:5535934 4.05E-190 tandem
Lcy11g0329 Lcy-Chr11:5535934 Lcy11g0330 Lcy-Chr11:5559584 1.94E-276 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0329 - - - 0.0