Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0330 ATGGCCAGCAACTCCGTCGAAGAAAGCTGGCGTTTCCTCAAACAAGTTGCACAAGGACGATGGTTTTCGGTCTTCGCCTCGTTTCTAATCATGATCGGCGCCGGTTCCACATACGTTTTCGGAACATACTCCAAAGCGATCAAGACCCAATTCGATTACAACCAAACCCAAATCAACACATTGGGATTCGCCAAAGATCTCGGCTCCAACCTCGGAGTTTTCGCCGGCCTTCTCGGCGAGGTGGCTCCGCCGTGGGTTCTTTTCCTCGTCGGCTCAACTCTCAACTTCTACAGCTACTTCATGATCTGGCTCTCCATCACTCGCCGGATCGCCAAGCCCCAATTCTGGCAAATGTTCTTTTACATTTCCTTGGCGGCCAATTCACAAAATTTCGCCAACACCGCCGTCTTGGTCACTAGCGTGAAAAACTTCCCGGACCGACGAGGCATCATTCTGGGGCTTCTGAAGGGCTTCGTTGGATTCGGAGGCGCCATCTTAACTCAATTCTATTTAGCCCTTTACGGCGACAAAGATCCAGCCAATTTGGTCCTTCTTCTCTCATGGTTGCCCACCGTTGTATCTTTGTTTCTCGTTCTCTCAATTCGAACAATCAAAACCCGTAAACATCCCGAGGAGCTCAAAGTCCTTTACCAGTTGCTTTACGTCTCCATAATTCTTGCGTTGTTTCTCTTGTTTTTGACACTTACCCAGAAACAAGCTGTGTTCTCTCAAGCTGGCTACATGGGTGGCGCCGCCGTTATTGCCGGCTTACTGTTCGTCCCTCTTTTAATCGCATTTAGAGAAGAGTACATGCTCTTCAAACTCAACAAACAAAATGCTGCTCCACCCGTTCCCATTTTCAGCCCCAAGCCGAGACCTTCATCCGATGTCGGACCAGGAAATTCCCTTTCCACAATCGAGGAAGTTCCAGAAACCCCGCCGTCGTGCTTCTCAAACATATTCAACAAGCCAGAAAGAGGAGAAGATTACACCATTTTTCAAGCTCTCTTCAGCGAAGACATGGCGCTTATCTTCGTCGGGGCGCTTTGTGGATGTGGGTCATCGATTGCAGCCATTGACAACATAGGCCAAATCGGCGAATCACTTGGCTACTCATCTAAAACCATAGGCATCTTCGTTTCTTGGGTTTCCATATTCAATTTTTTCGGCCGGGTTTGCTCCGGTTTCATCTCGGAAGCCGTTATGGCCAAATACAAATTACCTCGTCCTCTCATGTTCGCTTTTGCCCATCTCCTAACCTGCATTGGCATGCTGTTCATCGCCTTCCCGTATCCGGGTTCGATCTACGCAGCTTCGTTGATCATCGGGTTCGGGTTCGGAGCTCAAGTTCCGATGGTGTTCGCCATAATCTCGGAGCTCTTCGGCCTCAAACACTACTCAACAATCTTCAACTTTGGGCAACTGTCAGTGCCATTGGGATCTTATGTAATGAATGTGGATATAATTGGGAAGTTGTATGATATTCAAGCAGCAAAAGGAGGTGGTATTAGGAATGGGAAAGGGCTAACTTGCACGGGAGCTCATTGCTTCAGTGGCTCTTTCATTATTTTGGCTGTAGTGGTATTATTTGGAGCTGTGGTTTCGGTTGTGTTGGCTTATCGGACTCGAGACTTTTACCAAGGCGACGTTTATAAGAAGTACAGAGAGGATATGTGGATTCCTCAATCGGATATGGAATTCTATTGTTTAGATAACAAGAGGAAAGGTGATAACGGTTTGCCGCGGATTGTGATGCCGCCTAAGTATAGTTTTCTCAGGTAA 1782 47.64 MASNSVEESWRFLKQVAQGRWFSVFASFLIMIGAGSTYVFGTYSKAIKTQFDYNQTQINTLGFAKDLGSNLGVFAGLLGEVAPPWVLFLVGSTLNFYSYFMIWLSITRRIAKPQFWQMFFYISLAANSQNFANTAVLVTSVKNFPDRRGIILGLLKGFVGFGGAILTQFYLALYGDKDPANLVLLLSWLPTVVSLFLVLSIRTIKTRKHPEELKVLYQLLYVSIILALFLLFLTLTQKQAVFSQAGYMGGAAVIAGLLFVPLLIAFREEYMLFKLNKQNAAPPVPIFSPKPRPSSDVGPGNSLSTIEEVPETPPSCFSNIFNKPERGEDYTIFQALFSEDMALIFVGALCGCGSSIAAIDNIGQIGESLGYSSKTIGIFVSWVSIFNFFGRVCSGFISEAVMAKYKLPRPLMFAFAHLLTCIGMLFIAFPYPGSIYAASLIIGFGFGAQVPMVFAIISELFGLKHYSTIFNFGQLSVPLGSYVMNVDIIGKLYDIQAAKGGGIRNGKGLTCTGAHCFSGSFIILAVVVLFGAVVSVVLAYRTRDFYQGDVYKKYREDMWIPQSDMEFYCLDNKRKGDNGLPRIVMPPKYSFLR 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5559584 5561365 + Maker00032774 Lcy11g0330 646231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0330 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 555 - GO:0016020(PANTHER)
Lcy11g0330 593 Gene3D MFS general substrate transporter like domains 340 545 IPR036259 -
Lcy11g0330 593 MobiDBLite consensus disorder prediction 295 311 - -
Lcy11g0330 593 CDD MFS_Mch1p_like 19 532 - -
Lcy11g0330 593 Pfam Nodulin-like 20 265 IPR010658 -
Lcy11g0330 593 SUPERFAMILY MFS general substrate transporter 19 544 IPR036259 -
Lcy11g0330 593 MobiDBLite consensus disorder prediction 290 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0330 Lcy-Chr11:5559584 Lcy11g0333 Lcy-Chr11:5638652 1.67E-299 dispersed
Lcy11g0329 Lcy-Chr11:5535934 Lcy11g0330 Lcy-Chr11:5559584 1.94E-276 tandem
Lcy11g0330 Lcy-Chr11:5559584 Lcy11g0331 Lcy-Chr11:5575541 1.42E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0330 - - - 0.0