Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0331 ATGGCCAACGAACGGCAAGATGAAGTATTGGGTTTCATCAAACAAGTACTGCAAGGGCGGTGGTTTTCGGTATTCGCCTCGTTTTTGATGATGATCGGCAACGGTTCGACTTACATATTTGGAACCTACTCCAAAGTGATAAAGACCCAATTCGATTACAGTCAAACCCAAGTTAACACGTTGGGATTTGCGAAAGATCTCGGCTCCAACGTCGGAGTTTTCGCCGGCCTTCTCGCCGAGGTGGCTCCGTTGTGGGTTCAATTCATGATCGGCGCAATTCTTAACTTCTCCGGCTACTTCATGATTTGGCTCTCCATCACTCGTCGTATCCCCAAGCCCGAATTCTGGCAACTGTTCCTTTACATTTGCATCGGCACTAATTCATCAAATTTCGCCAACACCGCCATTATGGTCACAAGTGTTAGAAACTTCCCCGACCGACGAGGAATTATTTTGGGCCTTCTTAAAGGGTTTGTTGGTATTGGCGGTGCCATCATAACCCAACTGTACTTGGCCATCTACGGCCACGATGACCCATCGGATCTAGTTCTTCTTTTCTCTTGGCTTCCCTCAACCGTAATCCTCCTCCTTTTCTACTCGGTTCGACCTATCAAGATCCGTAAACATCCCGAAGAGCTCAAAGTCTTTTACCATTTACTTTATGTGTCCATAGTTCTGGCGCTTTTCATCTTGTTTTTGACCATAACTCAGAAACAAGTCACTTTCTCTCACGCGGGATACGCGAGTGGCGCATCCGTCATCGTTGGCTTGCTGAGCCTACACCTTCTGATCGCCGTTAGAGAAGAATTCTTGCTGTACAACCTCAAAAAACAAAACTGTGATCCATCTGCCATTGTTTCCATTGTTGAGCAAAAGCCTCCGTTGGCAACTGCCCCTGAGAATTCGATGTCCACGTTAGAGGAATTTGGAGAGGTTTCGCCGTCGTGTTTTTCAGACATATTTAACAAGCCTCCAAGAGGGGAAGATTTCACCATCTTGCAAGCTATTTTCAGCAAAGATATGGCGCTGATCTGTTTAGCTACTTTTTCTGGATGTGGGTCATCTCTTGCGGCCATTGATAATTTAGGCCAAATTGGCGAATCACTTGGCTATCCACCGAAAGCCATAAGCATCTTCGTTTCTTGGGTTTCGGTTTTCAATTTCTTCGGCCGAGTCTGCTCTGGTTTCATCTCTGAGGCATTGATGGTCAAATACAAAATGCCTCGTCCACTCCTGTTCGCTTTTGCCTTTCTCATAACTTGCATCGGCCAGCTTTGCATCGCCTATCCATCTCCGGGTTCGGTCTACATGGCTTCATTGATTATTGGGTTTGGTTTTGGAGCTCAAAATCCGTTGCTATTCGCCGTAATCTCTGACCTTTTTGGGCTCAAACATTACTCGACGTTGTTCAATTGTGGGCAATTGGCAGTCCCATTAGGGTCTTATTTACTAAATGTGGACGTAGTGGGGAAATTGTACGATAGGGAAGCTTTACGTGAAGGTAGGAGGACGATGGGCAAGGGGATAACTTGCACGGGAGCTCATTGCTTTAGTGGGTCTTTCACAATTTTGGCTGCATTCACATTGTTTGGAGCTTTGACTATGCTCGTGTTGGCTTATAAAACTCGAGAATTTTACAGAGGCGACATCTATAAGAAGTACAGAGAGGAAATGTGGATCCCGCAAACGAAAATGGAGTTCTACTGTTTAGATAACAAGAAGAACATTGATGACTAA 1737 45.48 MANERQDEVLGFIKQVLQGRWFSVFASFLMMIGNGSTYIFGTYSKVIKTQFDYSQTQVNTLGFAKDLGSNVGVFAGLLAEVAPLWVQFMIGAILNFSGYFMIWLSITRRIPKPEFWQLFLYICIGTNSSNFANTAIMVTSVRNFPDRRGIILGLLKGFVGIGGAIITQLYLAIYGHDDPSDLVLLFSWLPSTVILLLFYSVRPIKIRKHPEELKVFYHLLYVSIVLALFILFLTITQKQVTFSHAGYASGASVIVGLLSLHLLIAVREEFLLYNLKKQNCDPSAIVSIVEQKPPLATAPENSMSTLEEFGEVSPSCFSDIFNKPPRGEDFTILQAIFSKDMALICLATFSGCGSSLAAIDNLGQIGESLGYPPKAISIFVSWVSVFNFFGRVCSGFISEALMVKYKMPRPLLFAFAFLITCIGQLCIAYPSPGSVYMASLIIGFGFGAQNPLLFAVISDLFGLKHYSTLFNCGQLAVPLGSYLLNVDVVGKLYDREALREGRRTMGKGITCTGAHCFSGSFTILAAFTLFGALTMLVLAYKTREFYRGDIYKKYREEMWIPQTKMEFYCLDNKKNIDD 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5575541 5577277 + Maker00032589 Lcy11g0331 646232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0331 578 Gene3D MFS general substrate transporter like domains 340 546 IPR036259 -
Lcy11g0331 578 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 555 - GO:0016020(PANTHER)
Lcy11g0331 578 SUPERFAMILY MFS general substrate transporter 17 544 IPR036259 -
Lcy11g0331 578 Pfam Nodulin-like 20 265 IPR010658 -
Lcy11g0331 578 Gene3D Multidrug resistance protein D 1 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0331 Lcy-Chr11:5575541 Lcy5g0317 Lcy-Chr5:3031968 1.93E-187 dispersed
Lcy11g0331 Lcy-Chr11:5575541 Lcy11g0333 Lcy-Chr11:5638652 0 proximal
Lcy11g0330 Lcy-Chr11:5559584 Lcy11g0331 Lcy-Chr11:5575541 1.42E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0331 - - - 0.0