Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0339 ATGATTGTTTCAACAACGTGCAGCAACAATGGCGGAATTAGGATGGGAGAATTGCCGAGTTTTGCTCGGCAAGTGTTGTTGGGGCGGTGGTTTGCCATTTTCGTTTCGTTCCTCGTAATGACCTTCGCCGGCGGATTTTATTTGTTCGGTTATTTCTCCAATGACATCAGAGCAAAGCTCAATTGTGACCAAAGCTCACTCAACCAGATTGGCTTTTACAAAGACCTTGGTTCCAACGTCGGCATTGTCACCGGCCTTCTCTCCGATGTGGCGCCGTCTTGGGTCCTTCTCGTCATCTACGCCACCTTCAACTTCATCGGCTACTTCAAGGTCTGGCAAGGCGTCACCGGACAGGTCCCCAACCCGACCCTTGGCTACTTTTCCCTTTACATGGCCATCGCAGGCAACTCTCAAAGCATAGTCAATACAGTGGTGCTAGTGACGAGCGTGAAGAACTTCCCTGAAAGGAGAGGGGTGGTATTGGGCCTTTTGAAGGGCTTCGTGGGCATAGGTGCGGCTGTGCTGATCCAACTTTTCGTCGCCATTTATGGCCGTGATACCAAGACTCTGATTCTGTGGATTGCGTGGTTCCCGACTTTGATTACTTTGATGTTCGTTTTCACAATCAGGGAGATCAAAGTTGTGAAGCACCCCAATGAATTCAGAGTTTTCGTTCAGTTTCTATGGATCTCCATCATTCTGGCTCTGCTTCTCTCTGTCTTGATTTTCGCTCAGAAAAGGGTTGAATTCGATGCAATAGCCGACACGTTAGTCGTGATTGCAATCCTGGGTTTGCTTCTTCTTCCATTGTTGATCTCCATTAGAGAAGAAATTGTTCAGTGGAATCTCAAGAAAATGACCAAAGTTACCAGAATCCAATCGACCCCTCAAACGCCCTTAACCTTAGCGCCGTCTTCCACCAAAGTCCAACAATCAAAGCAACGCAATTCTTGGTTCGCGAACATTTTCGACAAACCCGAAAGAGGAGAAGACTACACGATTCTTCAAGCCATTCTCAGTTTCGACATGCTCATCTTGTACCTCACCATGATAATCGGGATCGGCTCGAGCTTCACGGCCGTGGACAATCTGACCCAGATCGGAGAATCCCAAGGCTACCATACCGAAACCATCAATTCATTCATCTCTGTGGTCAGCATTTCCAACTTCGCCGGCAGAATCTTTTCTGGGTTCGTTTCAGAAATCTTGCTCGAGAAGTACCAATTCCCCCGCCCGTTGATGCTGACCTTCACGCTCTTGGTTTCCTGCATTGGACACTTGTTGGTGGCCTTCCCCTTCCACGGTTCGCTCCTCATGGCATCCATCGTAATTGGATTTGCATTGGGCTCTCAAATTCCCCTGTATTTCGCTATAATTTCAGAGATCTTTGGTCTGAAACACTACTCCCGCTTGTACAATTTTGGGCAACTGTCTTGCCCGATTGGGACTTACGTTCTGAACGTGTTGGTTGCCGGGAATCTCTACGACCAGGAGGTAGAGAAGATGGGGCTTCATTCAAGCGATGGTATATGCATTGGGGATCAGTGTTACAGAAATTCTTTCACAATTTTGACAGCGCTGACGTTCGTGGGAGCTGGAATATCGTTGATCCTGGTGAAGAGAACGGCCGGGTTTTACAGAGGGGATATATACAAGAAGTTCAGAGAAGATATGGAATCTTTGAAGACGGAAGTGGAGCTTTACCCTCTTCCTGTGAAGAGGCCTTCTTCGAGTGTGATCACTATTGACGAACAAAGTACCGATACCAAGAGCTGA 1776 47.69 MIVSTTCSNNGGIRMGELPSFARQVLLGRWFAIFVSFLVMTFAGGFYLFGYFSNDIRAKLNCDQSSLNQIGFYKDLGSNVGIVTGLLSDVAPSWVLLVIYATFNFIGYFKVWQGVTGQVPNPTLGYFSLYMAIAGNSQSIVNTVVLVTSVKNFPERRGVVLGLLKGFVGIGAAVLIQLFVAIYGRDTKTLILWIAWFPTLITLMFVFTIREIKVVKHPNEFRVFVQFLWISIILALLLSVLIFAQKRVEFDAIADTLVVIAILGLLLLPLLISIREEIVQWNLKKMTKVTRIQSTPQTPLTLAPSSTKVQQSKQRNSWFANIFDKPERGEDYTILQAILSFDMLILYLTMIIGIGSSFTAVDNLTQIGESQGYHTETINSFISVVSISNFAGRIFSGFVSEILLEKYQFPRPLMLTFTLLVSCIGHLLVAFPFHGSLLMASIVIGFALGSQIPLYFAIISEIFGLKHYSRLYNFGQLSCPIGTYVLNVLVAGNLYDQEVEKMGLHSSDGICIGDQCYRNSFTILTALTFVGAGISLILVKRTAGFYRGDIYKKFREDMESLKTEVELYPLPVKRPSSSVITIDEQSTDTKS 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5749116 5751007 + Maker00032716 Lcy11g0339 646240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0339 591 SUPERFAMILY MFS general substrate transporter 30 545 IPR036259 -
Lcy11g0339 591 Gene3D MFS general substrate transporter like domains 322 546 IPR036259 -
Lcy11g0339 591 Pfam Major Facilitator Superfamily 348 540 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy11g0339 591 Pfam Nodulin-like 29 274 IPR010658 -
Lcy11g0339 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 555 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0339 Lcy-Chr11:5749116 Lcy7g0626 Lcy-Chr7:5718486 2.62E-170 dispersed
Lcy11g0339 Lcy-Chr11:5749116 Lcy11g0341 Lcy-Chr11:5759399 6.04E-25 proximal
Lcy11g0339 Lcy-Chr11:5749116 Lcy11g0340 Lcy-Chr11:5756709 1.98E-58 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0339 - - - 0.0