Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0340 ATGATTGTATCACAAACGCCGAGCTCCAATGGCGGAATTCGGAGTGGAGAATTGGCCGGTTTTGTTCAACAACTGGTGGTGGGGCGGTGGTTTTCCCTTTTCGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTACTTGTTCGCTTATTACTCCAGAGACATCAAAACGACGCTCAAATGTGACCAAACCACGCTCAACAAGATTGGCTTTTATAAGGACCTGGGATCGAACGTCGGCGTCATCGCCGGCCTGCTGGCCGAGGTGGCGCCGACTTGGTTCGTGCTGCTCGTCGGCGCCGCCTTTAACTTTCTCGGCTACTTCAAGATATGGCAAGCCGTCACCGGAAAAATTGTGCGGCCGACTGTTGAGTTTTTTTGCTTTTACATTATGGTCGGAGCAAACTCTCAGAATTTCGCCAATACAGGTAACCTTATGGATTTTCATCAACGCCCCCATCCCATTTGTTTTTTGAGTCCTGGTGACGTGCGTGAAGAACTTCCCAGAAAGGAGAGGGGTCCTATTGGGGCTTTTAAAGGGCTTCGTGGGCCTAAGTGGGGCTATAATGACCCAACTTTACGTGGCCCTTTACGGCCATGA 603 51.08 MIVSQTPSSNGGIRSGELAGFVQQLVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLKCDQTTLNKIGFYKDLGSNVGVIAGLLAEVAPTWFVLLVGAAFNFLGYFKIWQAVTGKIVRPTVEFFCFYIMVGANSQNFANTGNLMDFHQRPHPICFLSPGDVREELPRKERGPIGAFKGLRGPKWGYNDPTLRGPLRP 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5756709 5758458 + Maker00032817 Lcy11g0340 646241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0340 200 Pfam Nodulin-like 29 147 IPR010658 -
Lcy11g0340 200 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 147 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0340 Lcy-Chr11:5756709 Lcy7g0626 Lcy-Chr7:5718486 4.43E-46 dispersed
Lcy11g0339 Lcy-Chr11:5749116 Lcy11g0340 Lcy-Chr11:5756709 1.98E-58 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0340 - - - 0.0