Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0363 | ATGAAGCCACGTCTCTCCGCCACTCTCTCCGCCGCTGAAATGGAGAAAAGTGAGGCAAATATGGCGGCGGCGGTCAGTCCGTGTGCGGCTTGCAAGATTCTACGGCGGAGATGCAGAGAGAATTGCGTATTGGGGCCCTATTTTCCACCAAATGAGCCTCTCAAATTCACCATTGCCCATAGGGTATTTGGTGCTAGCAACATCATCAAGTTACTTCAGGATCTTCCTAAATCGCAAAGAGCAGACGCAGTGAACAGTATGGTATACGAAGCGAGTGCAAGAATAAGAGATCCAGTTTACGGGAGCACAGGCTCGATTTTCCAACTCCAAAGACAAATAAATGAGTTGCAAGCAGAGTTAGCCAAGGCTCAAGCAGAGCTTCTCAACATGCAATGTCAACAAGCCAATTTGGTGAGTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTTTGATCACAATTCACTTGATGGCATTTTCAACATTGGTAGCCCTCAAAGTTATCATCAAAGCTATTCACATTTGATTGAGGATAGTAATATTTTGGAGCCTCTTTGGACTTAG | 573 | 45.2 | MKPRLSATLSAAEMEKSEANMAAAVSPCAACKILRRRCRENCVLGPYFPPNEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGSTGSIFQLQRQINELQAELAKAQAELLNMQCQQANLVSLICKELAQMPQPPMFDHNSLDGIFNIGSPQSYHQSYSHLIEDSNILEPLWT | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6064387 | 6067051 | - | Maker00032597 | Lcy11g0363 | 646264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0363 | 190 | ProSiteProfiles | LOB domain profile. | 26 | 127 | IPR004883 | - | |
Lcy11g0363 | 190 | Coils | Coil | 106 | 133 | - | - | |
Lcy11g0363 | 190 | Pfam | Lateral organ boundaries (LOB) domain | 27 | 124 | IPR004883 | - | |
Lcy11g0363 | 190 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 25 | 147 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g0363 | Lcy-Chr11:6064387 | Lcy8g1878 | Lcy-Chr8:45098791 | 1.94E-60 | dispersed | |
Lcy11g0363 | Lcy-Chr11:6064387 | Lcy11g0364 | Lcy-Chr11:6118504 | 3.55E-77 | tandem | |
Lcy11g0363 | Lcy-Chr11:6064387 | Lcy7g1059 | Lcy-Chr7:11260556 | 5.74E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
19087 | None | None | None | None | Lcy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0363 | - | - | - | 0.0 |