Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0364 | ATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCGACCATCCTCCGTTCTCAGTCGCCGTCGTCGTCCTCTTTGCCGCCGCCGCCGAGCATTCAGGCCGGCGTTGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTCAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCCGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTTGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGGGCTGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATATGCCAGCTCCAAAAACAGATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACGCCGCCACCGGTGCCGCCGCCGGACCACCGCTCGGTTGACAACAATTTCAACATTGCCCCTCCTCAGAGCTACCAAAGCTACTCATCTTTGTTTGAGGATAGCAATATTTGGGAAGCCCTTTGGACATGA | 609 | 53.37 | MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAPPQSYQSYSSLFEDSNIWEALWT | 202 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6118504 | 6120090 | + | Maker00032594 | Lcy11g0364 | 646265 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0364 | 202 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Lcy11g0364 | 202 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Lcy11g0364 | 202 | ProSiteProfiles | LOB domain profile. | 38 | 139 | IPR004883 | - | |
Lcy11g0364 | 202 | Coils | Coil | 118 | 145 | - | - | |
Lcy11g0364 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 37 | 167 | - | - | |
Lcy11g0364 | 202 | Pfam | Lateral organ boundaries (LOB) domain | 39 | 136 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1785 | Lcy-Chr10:42215302 | Lcy11g0364 | Lcy-Chr11:6118504 | 9.19E-47 | dispersed | |
Lcy11g0364 | Lcy-Chr11:6118504 | Lcy8g1878 | Lcy-Chr8:45098791 | 2.94E-70 | dispersed | |
Lcy11g0363 | Lcy-Chr11:6064387 | Lcy11g0364 | Lcy-Chr11:6118504 | 3.55E-77 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
19088 | None | None | None | None | Lcy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0364 | - | - | - | 0.0 |