Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0364 ATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCGACCATCCTCCGTTCTCAGTCGCCGTCGTCGTCCTCTTTGCCGCCGCCGCCGAGCATTCAGGCCGGCGTTGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTCAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCCGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTTGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGGGCTGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATATGCCAGCTCCAAAAACAGATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACGCCGCCACCGGTGCCGCCGCCGGACCACCGCTCGGTTGACAACAATTTCAACATTGCCCCTCCTCAGAGCTACCAAAGCTACTCATCTTTGTTTGAGGATAGCAATATTTGGGAAGCCCTTTGGACATGA 609 53.37 MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAPPQSYQSYSSLFEDSNIWEALWT 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6118504 6120090 + Maker00032594 Lcy11g0364 646265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0364 202 MobiDBLite consensus disorder prediction 1 21 - -
Lcy11g0364 202 MobiDBLite consensus disorder prediction 1 29 - -
Lcy11g0364 202 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Lcy11g0364 202 Coils Coil 118 145 - -
Lcy11g0364 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 167 - -
Lcy11g0364 202 Pfam Lateral organ boundaries (LOB) domain 39 136 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1785 Lcy-Chr10:42215302 Lcy11g0364 Lcy-Chr11:6118504 9.19E-47 dispersed
Lcy11g0364 Lcy-Chr11:6118504 Lcy8g1878 Lcy-Chr8:45098791 2.94E-70 dispersed
Lcy11g0363 Lcy-Chr11:6064387 Lcy11g0364 Lcy-Chr11:6118504 3.55E-77 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19088 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0364 - - - 0.0