Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0508 ATGGGTTTCTTAGTTTCTCTCTCTAAACAGAGGGGTTTTATCATTTTCTTGAATCTCTCGTTTCTCTCAGTGGCTTGTGCTTTTTTGGCGATTCGGTTTCACTCTCCAGAATCCCAGTTCCATGTCCTCAGCAAGAGCTCGAGAAGAATCCATGGCAACGCTCAGGATGATTGCCAGAGTTTTCTTGGCCTAACTGAGTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAGCAACCCTTGCAACACCCAAGGATATATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCCTCAGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCAAAATTGTTGAATCTGTCCCCAACTATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTGGCTTTCATGGGAGATGGAACTAGTGATGTTGGCTTGAATACTGTTCTTGGCGGAGCCTCGTTCGTTACATGCGTCGTCGTTGGAATCATAAGCATTTTACTGCGTGGGCGACGAATTAAGGTGAATAGGTCTGCCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCTTGATATTGCTTCACGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTGTTTATGTTTTGGTTGTTTATATCTCCCATGCCCAATGGTTGAGATTTAGAAGTGATATTTGCCAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTTTGAGGGTCAAAATGAATCAAGAGATGACGACGACGACAACGACGATGTTAGAATCGATGTATATGATCTTTGTTTTTGTCCAAGATTATCACCTTCTTGTCTCATTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCAGTTGCTTCAGTAACATTTGCTCCCCTTCTCCTATCCCTTCTATGGGCATTTAACCACCAGGGCGATACGTCTGAGGCGAACCTGATCATCTGCGTCGTGGCTTTGCTCCTCGGATTTAGTTTTGGAATTGTTGCATTTGCAACAACTGAGAATTCAAGCCCACCAAAGAAGTGCCTGTTCCCTTGGCTAGCGGCTGGCTTCACCATGAGTTTAACATGGAGTTATATTGTAGCTCAGGAACTGGTAGGCCTATTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATCCTAGGACTTACCTTCCTGGCTTGGGGAAACTCTCTAGGGGATTTGGTTGCCAATGTGACCATGGCCTTGAATGGCGGGCAGCGAGGCGCCCAAATCGCCATCTCCGGCTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGAATGTCTCTCGTTGGCGCCTCGTGGAAGAAGTATCCTCAGCCGGTGACCATCCCCCCGGACCCTTATGTGATGGAGACGTTGGGGCTGTTGGTTGGAGGGTTGCTTTGGGCACTTCTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCAGTCTTGGGAGGAGGCCTTCTGGCTATCTACCTGACCTCTTTGCTCTTAAGGCTGTTGCAAGCTTTTGAGTCTTCCCTTTAG 1704 45.77 MGFLVSLSKQRGFIIFLNLSFLSVACAFLAIRFHSPESQFHVLSKSSRRIHGNAQDDCQSFLGLTEFEAKCSVLKSSNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDVGLNTVLGGASFVTCVVVGIISILLRGRRIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIVYVLVVYISHAQWLRFRSDICQPLLKEPPKDEFEGQNESRDDDDDNDDVRIDVYDLCFCPRLSPSCLIFLRILEIPLYLPRRLTIPAIAEENWSRPFAVASVTFAPLLLSLLWAFNHQGDTSEANLIICVVALLLGFSFGIVAFATTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPQPVTIPPDPYVMETLGLLVGGLLWALLALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFESSL 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11634606 11636309 + Maker00005104 Lcy11g0508 646409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0508 567 Pfam Sodium/calcium exchanger protein 406 559 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy11g0508 567 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy11g0508 567 Gene3D - 343 559 IPR044880 -
Lcy11g0508 567 Gene3D - 139 262 IPR044880 -
Lcy11g0508 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 23 565 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Lcy11g0508 567 MobiDBLite consensus disorder prediction 272 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0981 Lcy-Chr2:9138432 Lcy11g0508 Lcy-Chr11:11634606 2.80E-134 transposed
Lcy11g0508 Lcy-Chr11:11634606 Lcy2g2045 Lcy-Chr2:39184478 8.32E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0508 K13754 - csv:101204766 951.429