Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0876 | ATGGGGGCGATTATGGCGGTATCAGCTGTTCAAACGCTGCTATTTTTTGCTTTCTTCAACTTGGCTGCTTCCGATACTTATTCCAACGATTTTGGAGTGCTTCAATCCTTGAAAGATGAGTGGCAAAATATTCCACCAAGCTGGGAAACATCAAATGATCCATGTGGAACTCCCTGGGAAGGAGTGACTTGCAACAACTCAAGAGTAATTGCATTGACTTTATCAAATATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTTACTGAACTGAGACTATTGGACCTTTCCTCCAATCGCGATCTAACTGGTTCAATCTCTCCGGAACTAGGGAGCTTGTTGAATTTGAATATCTTATTTCTCATCTCTCTCAGGTCTTTATATTCTAACAAATTGACTGGTACCATACCACCGACTTTGGGAAAACTCTCCAAACTCTATTGGCTAGACCTGGCAGATAATCAGTTGACTGGTGCTCTCCCAGTTTCGACTCCCAAATCTCCGGGTTTGGATTTGCTTCTTGAGGCTAAACATTTTCATTTCAGCAAAAACCAGTTATCAGGTACCATTTCACCTAATCTTTTTGGCTCCGAGATGGTATTATTACACATATTATTTGACCAAAATAATTTTTCTGGGAGTATCCCACGAACATTGGGACTTGTTAAGACTCTTCATGTTCTTCGACTAGATCGAAATTCTTTAACTGGAGATGTCCCATCAAACCTAAACGACCTAATAAATGTCAATGAATTGAATTTAGCCAACAATAAGCTAACGGGTCCACTACCAAACTTAACTCAAATGAGTTCACTAAATTACGTGGACCTTAGTAACAACTCATTTAATTCATCAGTAGCTCCAGAATGGTTCTCAAATCTACAATCTCTCACCACTCTGATTGTTGAATATGGGTCAATACGAGGATATGTGCCAGAAGAAATCTTTAGCTTACCACATATACAACAAGTAAAACTGAAGAACAATGCATTTGGTGGGACATTAAATATGGATGACAGCATCAGCCAATCATTGCAGCTAGTTGATTTGCAAAATAACACTATATCCTCCGTTACCTCTGTTTCGGGATATACCAACGATTTGCTGCTGATAGGAAATCCTGTGTGTAACACTGGTGTCCTCTCAGATACAAACTATTGTCTGCTTCAACAACGACAAACAAAATCCTATTCTACCAGCCTTGTCAACTGTGGAAGTAAGTTATGTTCTCCTGACGAGAAGCTGAACCCTCAGAGTTGTAAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGCACCCACGTCCAGGGAATTGTCCAATATAACTCTGTTTCAATCACTGGAAACGAGCCTTTTGCACCACTTCAACGTTACGCCTTTTATTCAAGACCCTTTCTTTAATGTTGATGATTATCTTGAGATGCAGCTTGCACTTTTTCCAACCAATGATAAGTTTTTCAGTAGGACAGATATTCAGAGATTTGGGCTTGATTTGCACAATCAAACTTACAAACCTCCCCCCGAGTTTGGGCCGTATTATTTCATTGCATCTCGTTATCCATTTTCAGATATGGATAGTGGAACTTCAACCAACACCGGAGTGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTCGTTCTATGCCTCATTGGAATTGGAACTTATGCAATTCGACAGAAGAGACGTGTAGAAAAGGCCAAGTCAAATGCTTTATTGGTACCACGTGGAAACGATGGTGGAGGTGCACCACAATTAAAGGGAGCCAGGTGGTTTTCTTACGATGAACTTAAAAAATGCACGAATAATTTCTCCATGAGTAATGAGATAGGATCTGGAGGATTTGGCAAGGTATACAGAGGAACGCTGGTGGATGGAAAAGTAGTGGCAATCAAAAGAGCTACGCAAGGATCAATGCAGGGTGGCCATGAGTTCAAGACAGAAATTGAGCTGCTTTCGCGAGTTCATCACAAGAATCTTCTTGGTCTAGTGGGATTTTGTTCTGAACAAGGAGAACAGATCCTTGTTTATGAATTCATGCCTAATGGGACACTTAGACAGAGCCTAGCAGGGTATGTTGCTCCTGAGCCTGGGAAATCTGGTATTTATCTTGATTGGAAGAGAAGACTTCGTATCGCACTTGGGTCTGCCAGAGGATTGACTTACTTGCATGAGCTTGCTAATCCTCCCATAATTCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAATGTTTAAATGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTTGTCTCAGACAGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTGGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACTGAGAAAAGTGATGTGTACAGCTTTGGAATAGTTATGTTGGAACTACTAACTGCTAAGTTGCCAATTGAAAAGGGAAAGTACATAGTTCGTGAGGTGCATATGTTGATGAATAAGAGTGATGAAGAATATTATGGTTTGAAGCATATAATGGATGCAACCATAATCAACAATACTACAAGTCTTATTGGGTTTGGAAAGTTCTTAGAGTTGGCCATGCAATGTGTTGAAGAAGCAGCTGCAGACCGGCCCACAATGAGTGAAGTGGTTAAGACAATTGAGAACATTTTGCAAAATGATGGAATAAGTACAACCTCAACATCAGCATCCACATCTGCCACAGAATTTGGGACTTCCAAAACTGCTCCTAGACATCCTTATAATGATGCTATATTGAAAGAGGGTGTCAATGGCCGATGA | 2796 | 40.49 | MGAIMAVSAVQTLLFFAFFNLAASDTYSNDFGVLQSLKDEWQNIPPSWETSNDPCGTPWEGVTCNNSRVIALTLSNMGLKGKLGGDIGGLTELRLLDLSSNRDLTGSISPELGSLLNLNILFLISLRSLYSNKLTGTIPPTLGKLSKLYWLDLADNQLTGALPVSTPKSPGLDLLLEAKHFHFSKNQLSGTISPNLFGSEMVLLHILFDQNNFSGSIPRTLGLVKTLHVLRLDRNSLTGDVPSNLNDLINVNELNLANNKLTGPLPNLTQMSSLNYVDLSNNSFNSSVAPEWFSNLQSLTTLIVEYGSIRGYVPEEIFSLPHIQQVKLKNNAFGGTLNMDDSISQSLQLVDLQNNTISSVTSVSGYTNDLLLIGNPVCNTGVLSDTNYCLLQQRQTKSYSTSLVNCGSKLCSPDEKLNPQSCKCAYPYEGTLYFRAPTSRELSNITLFQSLETSLLHHFNVTPFIQDPFFNVDDYLEMQLALFPTNDKFFSRTDIQRFGLDLHNQTYKPPPEFGPYYFIASRYPFSDMDSGTSTNTGVVIGIAVGCAFLVLCLIGIGTYAIRQKRRVEKAKSNALLVPRGNDGGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGFGKVYRGTLVDGKVVAIKRATQGSMQGGHEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRQSLAGYVAPEPGKSGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDECLNAKVADFGLSKLVSDSGKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGIVMLELLTAKLPIEKGKYIVREVHMLMNKSDEEYYGLKHIMDATIINNTTSLIGFGKFLELAMQCVEEAAADRPTMSEVVKTIENILQNDGISTTSTSASTSATEFGTSKTAPRHPYNDAILKEGVNGR | 931 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26002677 | 26009333 | - | Maker00030694 | Lcy11g0876 | 646777 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0876 | 931 | ProSitePatterns | Protein kinases ATP-binding region signature. | 613 | 635 | IPR017441 | GO:0005524(InterPro) | |
Lcy11g0876 | 931 | Gene3D | Ribonuclease Inhibitor | 127 | 200 | IPR032675 | - | |
Lcy11g0876 | 931 | Gene3D | Ribonuclease Inhibitor | 32 | 126 | IPR032675 | - | |
Lcy11g0876 | 931 | Gene3D | Ribonuclease Inhibitor | 201 | 268 | IPR032675 | - | |
Lcy11g0876 | 931 | FunFam | Leucine-rich repeat protein kinase family protein | 577 | 682 | - | - | |
Lcy11g0876 | 931 | CDD | STKc_IRAK | 613 | 888 | - | - | |
Lcy11g0876 | 931 | SMART | serkin_6 | 607 | 868 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g0876 | 931 | Pfam | Protein tyrosine and serine/threonine kinase | 608 | 884 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy11g0876 | 931 | SUPERFAMILY | L domain-like | 41 | 378 | - | - | |
Lcy11g0876 | 931 | Gene3D | Ribonuclease Inhibitor | 269 | 368 | IPR032675 | - | |
Lcy11g0876 | 931 | Gene3D | Phosphorylase Kinase; domain 1 | 583 | 682 | - | - | |
Lcy11g0876 | 931 | FunFam | Predicted protein | 170 | 391 | - | - | |
Lcy11g0876 | 931 | MobiDBLite | consensus disorder prediction | 896 | 913 | - | - | |
Lcy11g0876 | 931 | Gene3D | Transferase(Phosphotransferase) domain 1 | 683 | 909 | - | - | |
Lcy11g0876 | 931 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 683 | 902 | - | - | |
Lcy11g0876 | 931 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 46 | 886 | - | - | |
Lcy11g0876 | 931 | MobiDBLite | consensus disorder prediction | 896 | 917 | - | - | |
Lcy11g0876 | 931 | SUPERFAMILY | Protein kinase-like (PK-like) | 592 | 897 | IPR011009 | - | |
Lcy11g0876 | 931 | ProSiteProfiles | Protein kinase domain profile. | 607 | 889 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g0876 | 931 | Pfam | Leucine rich repeat | 273 | 332 | IPR001611 | GO:0005515(InterPro) | |
Lcy11g0876 | 931 | Pfam | Leucine rich repeat N-terminal domain | 29 | 65 | IPR013210 | - | |
Lcy11g0876 | 931 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g0006 | Lcy-Chr11:57262 | Lcy11g0876 | Lcy-Chr11:26002677 | 2.13E-75 | dispersed | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy5g0015 | Lcy-Chr5:386987 | 0 | dispersed | |
Lcy6g0216 | Lcy-Chr6:1974397 | Lcy11g0876 | Lcy-Chr11:26002677 | 9.13E-37 | dispersed | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy13g1261 | Lcy-Chr13:29715591 | 8.85E-69 | wgd | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy13g0608 | Lcy-Chr13:7963263 | 4.81E-35 | wgd | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy3g0278 | Lcy-Chr3:9050272 | 5.13E-31 | wgd | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy6g1277 | Lcy-Chr6:16048770 | 1.40E-62 | wgd | |
Lcy11g0876 | Lcy-Chr11:26002677 | Lcy8g0871 | Lcy-Chr8:31362984 | 6.83E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65445 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0876 | - | - | - | 0.0 |