Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0893 | ATGCTCTGCCTCAACCTTGATGGCGGCGCCGACCACCCTCCACTTTGTTCTTCATGTAGCCACCATCAACCTCACTCCGCCGCCACTCCCATGAAAGGAAGCTCCCCAGACCCCACACCAATAAGAAACTCTATTCTTCGTGCTATTTCTCCATTCTTCAAGGTTGATCTCCCAATTCCTTTTGGACTTCCGTCGCCCTGTTTCCGATCCCATCGAAGCACGAAATTTCTCCCCTCCGCCGCTCACTCCGTCACTGGGCAAGCACTTCTATCCCAACTCATCACTCCCGCCGCTGCCCCTCCGTCATCGCTTTGTCTCAAGCGCTCACTCCACCAACATGAGGGAATTCTGAAGGAGAGAAAAAATAAAAATTCTGGGATTACTTGGAATGAATACAAATCCATGACGTTTACATTTAAGTTCGTGAATGAAACATTGAGGCTGGCAAATATTGCTCCTGGGATCTTTCGAAAAGCATTAAGAGATGTCGAGTTTAAGGGATACACCATCCCAGCAGGATGGGCTGTTATGGTCTGTCCTCCAGCCGTCCATTTGGATCCAAAAAATTACGTTGACCCACTTGCCTTCAACCCATGGCGATGGGAGCAGAGATGTGATGGGGCATCAAAGCATTTCATGGCTTTTGGTGGGGGCATGAGATTTTGCATTGGTGCAGACTTTGCCAAATTGCAGATGGCTGTGTTTCTCCATAACATGAAGACAATGGAGGCAGTCGGCGCTAGGGATCTTGCTAGTGAAAAGGACTACGAAGGTGGAGAGTTGAGGGGATTCGACATAGATATTGTTCCACCGATATTCACATCAGTTTTACACAATATAGGGCTAGAAATACCATCGGCATCTACATCTATCCCATACGATGAAACAAAAAATATTCCTACGTATAACTTGGGAGATGATGAAGACCATGGTAGTGAACTCTATGGTGGTCAGGATTGGGGGGACTACGAAGATGATGACGAGTACGAAGATGATGAGGACACAGACGTAGAGGTTGATGAAATAGTGGGAGATGGAGAAGAAGAGATTCACGTACAGAACACTGAGGTTCCTTCTACAGCTGAACAGGAGAAGACATGCTCTTTTATTCCGAATGCTTCATCTAAGGCAATCATCATGACAGACCAGTCTTCCTCTTCTGAAAATGTAGGAATTTGGAGAAATATTTATGTCTAA | 1197 | 46.2 | MLCLNLDGGADHPPLCSSCSHHQPHSAATPMKGSSPDPTPIRNSILRAISPFFKVDLPIPFGLPSPCFRSHRSTKFLPSAAHSVTGQALLSQLITPAAAPPSSLCLKRSLHQHEGILKERKNKNSGITWNEYKSMTFTFKFVNETLRLANIAPGIFRKALRDVEFKGYTIPAGWAVMVCPPAVHLDPKNYVDPLAFNPWRWEQRCDGASKHFMAFGGGMRFCIGADFAKLQMAVFLHNMKTMEAVGARDLASEKDYEGGELRGFDIDIVPPIFTSVLHNIGLEIPSASTSIPYDETKNIPTYNLGDDEDHGSELYGGQDWGDYEDDDEYEDDEDTDVEVDEIVGDGEEEIHVQNTEVPSTAEQEKTCSFIPNASSKAIIMTDQSSSSENVGIWRNIYV | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26613718 | 26624497 | + | Maker00030711 | Lcy11g0893 | 646794 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0893 | 398 | MobiDBLite | consensus disorder prediction | 301 | 315 | - | - | |
Lcy11g0893 | 398 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Lcy11g0893 | 398 | Pfam | Cytochrome P450 | 122 | 239 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | Gene3D | Cytochrome P450 | 110 | 249 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | MobiDBLite | consensus disorder prediction | 299 | 335 | - | - | |
Lcy11g0893 | 398 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 215 | 224 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lcy11g0893 | 398 | MobiDBLite | consensus disorder prediction | 319 | 335 | - | - | |
Lcy11g0893 | 398 | PANTHER | CYTOCHROME P450 26 | 109 | 241 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
Lcy11g0893 | 398 | PRINTS | B-class P450 signature | 222 | 233 | IPR002397 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | PRINTS | B-class P450 signature | 213 | 222 | IPR002397 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | PRINTS | B-class P450 signature | 157 | 184 | IPR002397 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | PRINTS | B-class P450 signature | 140 | 151 | IPR002397 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | PRINTS | B-class P450 signature | 185 | 200 | IPR002397 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy11g0893 | 398 | SUPERFAMILY | Cytochrome P450 | 122 | 239 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g0893 | Lcy-Chr11:26613718 | Lcy6g1968 | Lcy-Chr6:41800985 | 1.11E-69 | dispersed | |
Lcy12g1949 | Lcy-Chr12:40854607 | Lcy11g0893 | Lcy-Chr11:26613718 | 1.08E-14 | transposed | |
Lcy11g0893 | Lcy-Chr11:26613718 | Lcy12g0941 | Lcy-Chr12:14415155 | 5.69E-13 | wgd | |
Lcy11g0893 | Lcy-Chr11:26613718 | Lcy2g1756 | Lcy-Chr2:27958605 | 5.13E-23 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0893 | - | - | - | 0.0 |