Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g0921 ATGGCAGACGAGAAATTAGGCGAAGGCAACAACAATGGAGGTCAAGAAAAGAAGTTGAGGGGCCGAAAGTCTTCATGGGCAACCCTCCGCCGTGTAGACTCGCTCAATCTGGAGGCCGGGAGGGTTCCGGCCGGCGTAGCTCATCAACTCTCCAACGTGAATTGGCAGCAAACGTTGAGCTTGGCGTTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGGACGTCGCCGTTGTACGTGTACGCAAGCACTTTCTCAAACGGCATTGACAACATAGAGGACATCCTCGGCGTTCTGTCGCTGATAATCTACACAATAGCGTTGGTTCCATTGTTGAAGTACGTTTTCATTGTGCTGTGGGCGAATGATAACGGCGACGGTGGGACCTTCGCTCTGTATTCGCTCTTGTGCCGCTACGTGAAAGTGGGATTGATTCCGAACGACCAGCCGGAGGACAGGGAGCTGTCAAACTACCAGCTGGTAATGCCTTCAAACTTGAGGAGATCTCAGAAGGTGAAGGAGAAGCTTGAGAACAGTATGTTTGCAAAAATTGCCCTTTTCCTTGTCACTATTGCAGGGACTTCCATGGTTATTGGAGATGGGGTTCTCACTCCATGTATCTCGGTGCTCTCAGCAGTGAGTGGAATCAAATCACTTGGGACAGATGCGGTTGTGGGGATATCAGTAGCGATTCTTATAATGCTGTTCTGCATTCAACGATTTGGAACTGACAAAGTGGGATTCTCGTTTGCCCCAATAATCTTCGTCTGGTTTTCATTCATCGGTGGCATTGGGCTCTACAACTTGTTCAAGCACGACCCTGGTGTTCTCAAAGCTTTCAACCCTAAATATATCATTGATTACTTCAAAAGAAATGGCAAACAAGCCTGGGTCTCGCTTGGTGGAGTTTTTCTCTGCATTACAGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTCAGAGCCATTCAGATTAGTTTCTCTTCCATTGTATTCCCTGCTTTAATAGCAGCCTACAGTGGGCAAGCTGCTTATCTAAGAAAATTCCCTGACCACGTCGGCAATACTTTCTACGACTCAATTCCAGGTCCTTTGTATTGGCCAACATTCGTAGTAGCCGTGGCAGCTTCAATCATAGCAAGCCAAGCAATGATCTCAGGAGCCTTTGCAATCATTTCACAGTCCCTGTCTCTAGGCTGCTTCCCCAGAGTGAAAGTAGTCCACACTTCACACAAGTACGAAGGCCAAGTCTACATCCCAGAAATCAACTACCTTCTGTTGGTGGCCTGTGTCATCGTCACCGCCGCCTTCAGGACCACCGAGAACATTGGCCACGCCTACGGCATCGCTGTCATCACCGTCATGATCATGACCACCGGCATGGTTTCTTTGATCATGATCGTCATTTGGAAAACCAGCATTTGGTGGATCGCTTTGTTCATTCTCGTCTTTGGCTCCATTGAGATGCTCTATTTCTCCTCTGTTCTCTACAAGTTCACTCAGGGCGGGTTTCTTCCTCTCGTCCTTGCTTTTTTCCTCATGGCTGTCATGATGGTGTGGCATTATGTTCATAGGGAGAGGTACCTTTTCGAGCTCAAAAACAAGGTCTCTAGTGGCTACATAACGGAGCTGGCTAGTAATCCTGATGTTAACCGAATTCCTGGAATTGGGCTTCTCTACTCGGAGCTGGTTCAAGGGATTCCTCCTATCTTCCCTCACTTCATCTCTAGCATTCCCTCCGTCCACTCTGTCATCGTATTTGTCTCAATTAAGTCGATTCCGATCAGCAAAGTGGCACCCGAGGAGCGGTTTCTGTTCCGACAGGTGGAGCCAAGGGAGTATCGGATGTTCAGATGTGTGGTTAGATACGGCTATAAAGACGTAATCACCGGATCTGCGGAGTTTGAGCGGCAGTTGGTGGATAGCTTGAAAGAGTTCATACGACAAGAACATGTAATGCTCGAAGGTGTCCCAGATTCCTCAGTAGAGCCAGTCTCGAACCCGACCCACTCAGGCAAAATCGAACCGAAAGTAAAGCCTTCTTCAGCAACAGTGCACGTTGAAGGAGCTCTGCCAGAAGTGGCAAGCCAGTCTCGGCGCTCGTCAGGCTCCATCCAGTCGTTCAACGCTTCGAAATCAAGAAGTTCTTCGAACGCAATTGTTCAAGTGCCAGTGCCTGAGGGAGTGGAAGAAGAGATGGAATTTGTAGAGAAAGCGATGAAGAAAGGCGTTGTTTATCTGCTGGGAGAGGCAGAGGTGATGGCTGAACCAAAATCGTCCTTGTTTAAGAAGATGGTGATCAACTATGCGTATAGTTTCTTGAGGAAGAACTTCAGGCAAGGGGAGAACATTCTCGAGATTCCACGCACCAGGCTTCTCAGGGTTGGAATGACTTACGAAATTTGA 2412 48.51 MADEKLGEGNNNGGQEKKLRGRKSSWATLRRVDSLNLEAGRVPAGVAHQLSNVNWQQTLSLAFQSVGVVYGDIGTSPLYVYASTFSNGIDNIEDILGVLSLIIYTIALVPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNDQPEDRELSNYQLVMPSNLRRSQKVKEKLENSMFAKIALFLVTIAGTSMVIGDGVLTPCISVLSAVSGIKSLGTDAVVGISVAILIMLFCIQRFGTDKVGFSFAPIIFVWFSFIGGIGLYNLFKHDPGVLKAFNPKYIIDYFKRNGKQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALIAAYSGQAAYLRKFPDHVGNTFYDSIPGPLYWPTFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVVHTSHKYEGQVYIPEINYLLLVACVIVTAAFRTTENIGHAYGIAVITVMIMTTGMVSLIMIVIWKTSIWWIALFILVFGSIEMLYFSSVLYKFTQGGFLPLVLAFFLMAVMMVWHYVHRERYLFELKNKVSSGYITELASNPDVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVAPEERFLFRQVEPREYRMFRCVVRYGYKDVITGSAEFERQLVDSLKEFIRQEHVMLEGVPDSSVEPVSNPTHSGKIEPKVKPSSATVHVEGALPEVASQSRRSSGSIQSFNASKSRSSSNAIVQVPVPEGVEEEMEFVEKAMKKGVVYLLGEAEVMAEPKSSLFKKMVINYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27668715 27676589 - Maker00030675 Lcy11g0921 646822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g0921 803 Pfam K+ potassium transporter integral membrane domain 61 540 IPR053951 -
Lcy11g0921 803 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 803 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy11g0921 803 NCBIfam potassium uptake protein 61 803 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy11g0921 803 MobiDBLite consensus disorder prediction 660 685 - -
Lcy11g0921 803 MobiDBLite consensus disorder prediction 1 24 - -
Lcy11g0921 803 Pfam K+ potassium transporter C-terminal domain 556 803 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0921 Lcy-Chr11:27668715 Lcy12g0302 Lcy-Chr12:3716820 6.19E-292 dispersed
Lcy10g2390 Lcy-Chr10:47494113 Lcy11g0921 Lcy-Chr11:27668715 8.51E-225 transposed
Lcy6g0363 Lcy-Chr6:3339127 Lcy11g0921 Lcy-Chr11:27668715 1.76E-180 transposed
Lcy11g0921 Lcy-Chr11:27668715 Lcy6g1808 Lcy-Chr6:37052524 1.60E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g0921 K03549 - csv:101205628 1262.28