Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g0966 | ATGGCAAAACAGCTTGCTGCTCACCAAAACAGTTCCCTGGAGAGCTTGTGCAGCAGCCGTCAGGACCCACTTAACTGGGGTGTGGCGGCTGAATCAATGAAGGGAAGTCATTTGGATGAGGTGAAGCGGATGGTGGAAGAGTATCGGAGGCCTGTGGTGAAGCTGGGAGGACAAACACTCACCATTTCCCAAGTCGCTGCTATTGCCACTCGTGATAATGATGTCGTGGTTGAATTGGTCGAGTCTGCGAGGGCTAGTGTCAAAGCCAGTAGTGATTGGGTGATGGAGAGCATGAGTAAAGGCACTGACAGTTATGGTGTCACTACTGGCTTTGGTGCCACTTCCCACAGAAGAACCAACCAAGGCGGTGCTCTTCAAAAGGAGCTCATTCGATTCTTGAATTCTGGCGTCTTCGGAAATGGGACTGAGTCAAGCCACACTTTGTCTCACTCTGCCACTAGAGCGGCCATGTTGGTGAGAATCAACACTCTCCTTCAAGGCTATTCTGGCATTAGATTCGAGATTTTGGAAGCGATTGCTAATCTCTTGAACCACAACGTCACTCCATGCTTGCCATTGCGTGGGACGATTACAGCTTCGGGAGATTTAGTCCCTTTGTCTTATATTGCGGGGCTACTCACAGGTCGTCATAACTCCAAGGCCATTGGACCCCATGGTGAAACCCTTGATGCAAAGGCTGCTTTTGAACAGGCTTGTATTGATTCTGGATTCTTTGAGTTGCAGCCTAAGGAAGGCCTTGCTCTTGTCAATGGCACTGCTGTTGGTTCTGGTTTAGCTTCCATTGTTCTCTTTGAGGCAAATATATTGGTTGTTTTGTCTGAAATTTTATCTGCCATTTTTGCTGAGGTGATGCAAGGAAAGCCTGAATTCACTGATCATTTGACCCATTAG | 912 | 48.03 | MAKQLAAHQNSSLESLCSSRQDPLNWGVAAESMKGSHLDEVKRMVEEYRRPVVKLGGQTLTISQVAAIATRDNDVVVELVESARASVKASSDWVMESMSKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNSGVFGNGTESSHTLSHSATRAAMLVRINTLLQGYSGIRFEILEAIANLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAIGPHGETLDAKAAFEQACIDSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILVVLSEILSAIFAEVMQGKPEFTDHLTH | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29300161 | 29301072 | - | Maker00030704 | Lcy11g0966 | 646867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g0966 | 303 | SUPERFAMILY | L-aspartase-like | 22 | 303 | IPR008948 | GO:0003824(InterPro) | |
Lcy11g0966 | 303 | FunFam | Phenylalanine ammonia-lyase | 13 | 259 | - | - | |
Lcy11g0966 | 303 | Gene3D | - | 14 | 259 | IPR024083 | - | |
Lcy11g0966 | 303 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 195 | 211 | IPR022313 | GO:0016841(InterPro) | |
Lcy11g0966 | 303 | Gene3D | Fumarase/aspartase (Central domain) | 260 | 303 | - | - | |
Lcy11g0966 | 303 | PANTHER | HISTIDINE AMMONIA-LYASE | 19 | 303 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Lcy11g0966 | 303 | Pfam | Aromatic amino acid lyase | 60 | 303 | IPR001106 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g0966 | Lcy-Chr11:29300161 | Lcy11g0971 | Lcy-Chr11:29389415 | 1.46E-190 | dispersed | |
Lcy11g0966 | Lcy-Chr11:29300161 | Lcy11g0969 | Lcy-Chr11:29375537 | 1.17E-193 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g0966 | K10775 | - | csv:116401606 | 549.666 |