Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1331 ATGGCGTCGTCTCTGATTCTGAATCCCGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAAAAGAAGAAGAAAGCGGCGAGGGAAGATGATCGTCAAGACCAGGATCGCATCAAGTGGAAATCACAAGCGCAGCATCAAGTTTACTCTTCGAAGCTGTGGCGCGCCTTGAGACAGGTCAGGATCAGTCCTCCTTCTTCCCCGTCGGCACCGAACGAGACGCCGCGCCGCGGCCGAGCCGTGCGGGAGGCGGCTGATACGGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCACAATCGGCAGAAGGTGCGTGCGAGTGGAAACAGCCGAACGAAGAAGCCGAGAGTCAGCGTATTGCGGTTGAGAGGGAAGGGATTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCCGGAAGCAACCGCTGCCGGTGATTCTGGATGAAGCAACCGATTACATACCCGCACTGGAGATGCAGATCCGAATAATGTTCAAGGAGGAGTTCTCTGTTCTTTTTATTTTGTGCGTGAAATTGGGCTCTGTTTTGTTTAGATTCCTTACTCGTGAAGAAGTTCATCAATTTACAGCAAAGAGAGGGAGGGTGTCGTTGGAGAAAAAGATTGCGCGAGAGTCTTGCCAGAGTTCAGACACCGTGTTACACTCAAAATCATCAACACGCATGGGTCTTTGTTTGTTGTGGCCGAGCATTAGGTTCGTCGATGACAAGAGCTGCGTCGTTGCTGCAAGTGCACAACATGGGATGTACTTTGTTCTGCTATCAGAGTCAAAGGAGCGTTGTTGTCACTGGAGAATCGACAAAGTTGAAGAGATATGA 909 51.49 MASSLILNPVASSERSRDSSRKKKKKKAAREDDRQDQDRIKWKSQAQHQVYSSKLWRALRQVRISPPSSPSAPNETPRRGRAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKVRASGNSRTKKPRVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPALEMQIRIMFKEEFSVLFILCVKLGSVLFRFLTREEVHQFTAKRGRVSLEKKIARESCQSSDTVLHSKSSTRMGLCLLWPSIRFVDDKSCVVAASAQHGMYFVLLSESKERCCHWRIDKVEEI 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36952604 36957674 - Maker00032037 Lcy11g1331 647232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1331 302 MobiDBLite consensus disorder prediction 25 43 - -
Lcy11g1331 302 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 188 IPR044660 GO:0006355(InterPro)
Lcy11g1331 302 MobiDBLite consensus disorder prediction 63 83 - -
Lcy11g1331 302 MobiDBLite consensus disorder prediction 1 46 - -
Lcy11g1331 302 CDD bHLH_AtIBH1_like 137 188 IPR044549 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1331 Lcy-Chr11:36952604 Lcy12g0860 Lcy-Chr12:11865896 1.07E-69 dispersed
Lcy11g1331 Lcy-Chr11:36952604 Lcy2g2346 Lcy-Chr2:49380921 1.32E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1331 - - - 0.0