Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1368 ATGGCCATCGCCGATCTCATCCTCCTCCTGATCTTCACCGCCATACCCTTTTCGATTTCTCAGCCAACTGACCAAGCTCCACCGCCGGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAACGAAGCTTCCCCCGAATCTCACTGATCTGACCCAACAGCCGTACCGATTCGAGTCCACTCTCTCGATTCTCAACAACGGCCTTCAGGAGCTCAAGTCTTGGAGGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCGGCCTCCGGCGCCGTCCTCGCCGATGGGAATAGCGTTCCTGGAAACGTCGGCAATGGGACCGTCTTTGCTGGGTTTCCGATGACCGACTTGAAGACGGCGATTGAAACTGCCGGAGACTTCACTCAGATGCAGGTCCAAGTCAAATTGCTTGGAACCCAATTTGGGGTTGCCCCTCCGAATAGTCCGATGCCTTCGAATATATCGCTTGCCAATGATGGATACCGCTGCCCCAGGCCAACTCAACAAGGTACCCCCCCTCCTCTAGATTCTAGTGATTTATCCCAAATCTTCTGCAGTTTCTCAGTTGTTGGAAAATTTTACAATCTGGGGAAGAGTGAGATGCACGTCTGTTGCAGACCCGATGATAGCGTTAAAACAAACATCACAACCAGTGAAGAGTTCTTACCTCGCCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGGACCTATGATTCAAGTTATTGGGCACAAGTCACAATTGCTAACCATAATCCTCTTGGTCGTCTTGACTATTGGAAGTTGAGCTGGGATTGGATGAGGGATGAATTTATCTATTCAATGAAAGGGGCTTATCCTTCTGTTGTTGATTCTACTGAATGCATTTTTGGTAGACAAGGCACTTATTATCGGGATTTAGACTTTGCCAATGTATTAAGCTGTGAAAGAAGGCCAACGATTGTTGATTTGCCTTCAACTAAGGCCAATGACTCCACTCTCGGGTTGATCCCTTTCTGTTGTCGAAATGGGACTATTTTGCCTTCGCATATGGACCCGAGCAAGTCGATTTCTGCATTCCAGATGCAGGTTTTTAAAATGCCACCGGATCTCAATAGATCCCAGATTACACCTCCTCAGCATTGGCAGATCAGTGGCATTCTAAACCCCACATATAAATGTGGAGCTCCAGTGAGGGTAAGTCCTAGCGAATTCCCCGACGCAAGTGGTTTACCGTTGAATTCGACTGCAGTGGCTAGCTGGCAGGTTGTTTGTAATATAACACATGTCAAGGATGACACACCGAAGTGCTGCGTTTCGTTTTCAGCTTACTACAATGATTCTGTCATCCCGTGCAGAACGTGTGCTTGTGGATGCTCACATAACTCTGCCCGCACATGTAATGCAACCTCCCCTGCAATGCTTCTCCCACCTGAAGCCCTCCTTGTTCCTTTTGAGAATAGAACTGCCCTGGCTGTTGCTTGGGCTGGTCTTAAACATTTCCCAGTTCCTAACCCGATGCCATGTGCGGATAACTGCGGTGTCAGTATCAATTGGCATTTGTATACTGATTATAGAGACGGATGGAGTGCGAGGATCACGCTCTTCAACTGGGACGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTTGAGATGAACAAAGCAGCACCTGGTTTCCAGGCAATGTACTCATTCAACGCAACCACCTTGGAATTGGATGGTGCCAATAACACGATCTTTATGCAGGGTAAACCTGGACTAAACTATCTCGTGGGCGAAACAGATGGAATCAACCCAGCAAACGATCCGAGGGTACCTGGAAAACAGCAATCCGTGATCTCATTTACAAAGAAGAACATACAAGGTCTTAACATGGCTGCAGGACATGGGTTCCCCACAAAAGTATTCTTCAATGGGGAAGAATGCTTACTTCCAAAAATGTTCCCAGCCAACGACAGCCGAAGGAACTTAGCTTCGTTCATTCCGAGCATCCTAGCGCTACTACTCGTGTTCATGTTTATTCAGCAATAG 2034 47.49 MAIADLILLLIFTAIPFSISQPTDQAPPPAADSCNGIFLSYSFNQGTKLPPNLTDLTQQPYRFESTLSILNNGLQELKSWRVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPMTDLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNSPMPSNISLANDGYRCPRPTQQGTPPPLDSSDLSQIFCSFSVVGKFYNLGKSEMHVCCRPDDSVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVTIANHNPLGRLDYWKLSWDWMRDEFIYSMKGAYPSVVDSTECIFGRQGTYYRDLDFANVLSCERRPTIVDLPSTKANDSTLGLIPFCCRNGTILPSHMDPSKSISAFQMQVFKMPPDLNRSQITPPQHWQISGILNPTYKCGAPVRVSPSEFPDASGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAYYNDSVIPCRTCACGCSHNSARTCNATSPAMLLPPEALLVPFENRTALAVAWAGLKHFPVPNPMPCADNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVEMNKAAPGFQAMYSFNATTLELDGANNTIFMQGKPGLNYLVGETDGINPANDPRVPGKQQSVISFTKKNIQGLNMAAGHGFPTKVFFNGEECLLPKMFPANDSRRNLASFIPSILALLLVFMFIQQ 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 37407930 37411509 + Maker00031640 Lcy11g1368 647269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1368 677 PANTHER COBRA-LIKE PROTEIN 7 20 675 - -
Lcy11g1368 677 Pfam COBRA-like protein 250 429 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1368 Lcy-Chr11:37407930 Lcy9g1219 Lcy-Chr9:36599933 2.52E-214 dispersed
Lcy11g1368 Lcy-Chr11:37407930 Lcy6g1379 Lcy-Chr6:20045346 1.91E-277 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1368 - - - 0.0