Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1506 ATGGGTATTTCATGGAGTAACAGAAGAAGAAACAACTATCTTCAAAACCCACCTCCGCCTCCTCCTCCGCCCTACCTTTCTTCTTCCTCTTTCTATTACCCTTCAGAACCCCAATCTCTTTCTCCGACTCCACCGCCGCCGCCGCCGCCACCGCCGACGACCCATCAGTTCACCAATTCCCACCCTCCTCCCCCGCACGGCCACCCTTACGGTCCAACTCCTCAGCCGCTAACTCTGCCGCCGATTCATCCTCCCCCTGCCCCAGCTCCTCACTCCTATTACTTCTCCGGTGGGTACAATTCGTGTAATTATGGGAATTCTTCGATGGGGCGTTTCAATTTTCACCCTTACTTTGCCAATCAGAGTAATGGGTGGTCCCAAATTCGTCCGGTGATGGGGCCGCCGTTGCTTCCGCCACCTCCTCTGCCGTTTGTGGAGCATCGGCAGGCGAAGAAGGTTAGAAATGATGTGAATGTGCATAAGGATACTTTGAGGATTGAGGTGGACGAGCAGAACCCTGATCAGCACTTGGTTTCTTTCGTTTTCGATGCTTTGTATGATGGAAGCATAACCATTCTATTTTTTGCCAAGGAAGAGCCCAACTGTAGGTTTGTTCCAGTATATCCCGATGCCTTTAAGCCAGTGAAAATCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCTGTGGGAACTGGCTTTGACTTGGGATTTTTCGAGTTGGACGACCTCTCAAAACCTTCACCTGCTGAAGACGTTTTCCCTCTTGTCATATCAGCTGAGACTTGTTCACCCTCTCAGTCCAATGATGAAAGAATTGGTGAGCCTCAATCAGATAATTCACACATGCAAATCACTCAAGCTGTTCTGGAGAAGAAAAATGGCGGTCCTTTCCAAGTTAGAGTGATCAGGCAGCTACTGTGGATTGATGGAGTGCGATATGAGTTGCGTGAGATATTTGGAATAGGGAGTTCATCAGCAGAAGGTTTTGACGATAATGACACCGGGAAGGAGTGTGTGATCTGCATGACTGAACCCAAAGATACTGCCGTGTTACCATGCCGACATATGTCATCTCAGAGCTGA 1089 49.13 MGISWSNRRRNNYLQNPPPPPPPPYLSSSSFYYPSEPQSLSPTPPPPPPPPPTTHQFTNSHPPPPHGHPYGPTPQPLTLPPIHPPPAPAPHSYYFSGGYNSCNYGNSSMGRFNFHPYFANQSNGWSQIRPVMGPPLLPPPPLPFVEHRQAKKVRNDVNVHKDTLRIEVDEQNPDQHLVSFVFDALYDGSITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFELDDLSKPSPAEDVFPLVISAETCSPSQSNDERIGEPQSDNSHMQITQAVLEKKNGGPFQVRVIRQLLWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHMSSQS 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 38939221 38942377 + Maker00031969 Lcy11g1506 647407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1506 362 MobiDBLite consensus disorder prediction 1 85 - -
Lcy11g1506 362 PANTHER MAHOGUNIN 66 359 IPR045194 GO:0016567(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)
Lcy11g1506 362 MobiDBLite consensus disorder prediction 38 85 - -
Lcy11g1506 362 MobiDBLite consensus disorder prediction 14 28 - -
Lcy11g1506 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 362 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1506 Lcy-Chr11:38939221 Lcy5g0283 Lcy-Chr5:2652287 1.39E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1506 K27504 - csv:101203938 598.201