Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g1508 | ATGGCTCACATTGCTGTGGAGAGAAACAGGAGGAGGCAGATGAATGAACATCTTAGGGGAGATCAAGCGTCGATTATTGGGGGAGTGATAGAGTTCATCAAGGAGTTGCATCAAGTTTTGCAGTCGTTGGAGTCGAACAAACGGAGGAGGAAGAGTGTGAGTCCTAGCCCTGGTCCGAGTCCGAGGCCGCAGGCGGTGGCAGTTGCCGATGGACCGTTTGGGTTTGAAAACGGAGTTGAGGTTGGAGCATGTTGCAACTCGTCGGTTGCGGACGTCGAAGCGAAGATTTCGGGTTCGAACGTGTTGTTGAAGATCATTTCCCGACGGATTCCCGGGCAACTTTCGAAGATGATTGGTGTGTTGGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATCAGTAGTATGGATGACACTGTTCTCTACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAGCTAAGTTTGGAGGAATTAGCTTTTGAAGTTCAACAAAGCTTCTGCTCTCAAGTTTACTTATGCCAGTGA | 528 | 48.48 | MAHIAVERNRRRQMNEHLRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSVSPSPGPSPRPQAVAVADGPFGFENGVEVGACCNSSVADVEAKISGSNVLLKIISRRIPGQLSKMIGVLERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAFEVQQSFCSQVYLCQ | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 38969433 | 38971181 | - | Maker00032139 | Lcy11g1508 | 647409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g1508 | 175 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 50 | IPR036638 | GO:0046983(InterPro) | |
Lcy11g1508 | 175 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 167 | IPR044283 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER) | |
Lcy11g1508 | 175 | MobiDBLite | consensus disorder prediction | 44 | 65 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1508 | Lcy-Chr11:38969433 | Lcy11g1771 | Lcy-Chr11:41518815 | 1.70E-37 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g1508 | - | - | - | 0.0 |