Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1508 ATGGCTCACATTGCTGTGGAGAGAAACAGGAGGAGGCAGATGAATGAACATCTTAGGGGAGATCAAGCGTCGATTATTGGGGGAGTGATAGAGTTCATCAAGGAGTTGCATCAAGTTTTGCAGTCGTTGGAGTCGAACAAACGGAGGAGGAAGAGTGTGAGTCCTAGCCCTGGTCCGAGTCCGAGGCCGCAGGCGGTGGCAGTTGCCGATGGACCGTTTGGGTTTGAAAACGGAGTTGAGGTTGGAGCATGTTGCAACTCGTCGGTTGCGGACGTCGAAGCGAAGATTTCGGGTTCGAACGTGTTGTTGAAGATCATTTCCCGACGGATTCCCGGGCAACTTTCGAAGATGATTGGTGTGTTGGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATCAGTAGTATGGATGACACTGTTCTCTACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAGCTAAGTTTGGAGGAATTAGCTTTTGAAGTTCAACAAAGCTTCTGCTCTCAAGTTTACTTATGCCAGTGA 528 48.48 MAHIAVERNRRRQMNEHLRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSVSPSPGPSPRPQAVAVADGPFGFENGVEVGACCNSSVADVEAKISGSNVLLKIISRRIPGQLSKMIGVLERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAFEVQQSFCSQVYLCQ 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 38969433 38971181 - Maker00032139 Lcy11g1508 647409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1508 175 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 50 IPR036638 GO:0046983(InterPro)
Lcy11g1508 175 PANTHER TRANSCRIPTION FACTOR FAMA 1 167 IPR044283 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER)
Lcy11g1508 175 MobiDBLite consensus disorder prediction 44 65 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1508 Lcy-Chr11:38969433 Lcy11g1771 Lcy-Chr11:41518815 1.70E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1508 - - - 0.0