Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g1589 | ATGCCCGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTGCAGAACACTGTTCAAAAAGCTCCAAAATCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACAGCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGAGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGACCAGGGAGAAGTCTGTATGAGGCCCAGTTCTCGGCCCTGCACGGTGGCGCTTAAACCCGACGGACCGGAGATTACAGCTGGAGCTCTAGTGGCGACTGTTAATCCTAATCCAAATGGTGGAAACATTTGTGGGATGGAAATGGGTTTTCGAAATTCAAGCAAGTCTGTGAGTTTTGCCCCAAGGCCTGGATTCGGACAAGTTGGGACAAAGTGTATTGTAAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGCCATCAAGAACTGTTAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTTTGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTCATTAAGTTTGTTGCACGTGCAAACTTACACCATTTGGGTCAGTTTCTCGCGGGTAAGCGCGCGGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCCAAAAGGTACTGTCCTATCGGTAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTCGAATCATGGTGTGGTTTTTATCAGAGTATAAGACCTACTCAGATGGGACTGTCTCTTAACATTGATATGGCTTCAGCTGCATTTATCGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGTAAAGATGTTTTGTCCCGGCCATTGTCTGATTCGGATCGCGTAAAGATTAAAAAGGCTCTTAGAGGGGTGAAAGTTGAAGTAACGCACCGGGGTAATGTAAGGCGGAAGTATCGAGTTTCGGGTCTGACATCACAGCCTACAAGAGAACTAGTGTTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACACGCGCATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTACCAATGGAGGCCTGCAAAATTGTAGGGGGGCAAAGATATACAAAGAGATTGAACGAGAAGCAAATAACCGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGAGAAAATGACATTTTGCAGTTTGTTCTCTTGTGGCAGACTGTTCAACATAATGCCTATGACAATGATCCTTATGCAAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAGGCTAGAATTCTTCCTCCTCCCTGGCTGAAATATCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTCGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACCGTTAACCGGTGGGCATGTATCAACTTCTCTAGGAGTGTGCAAGAGAGCGTTGCTCGTGGGTTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCAATATACAATGCAAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCGATGAACAAGACAAAAGGAAAAGAGTTAGAGCTTTTATTAGCTATTTTACCTGACAATAATGGTTCACTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTTTAATATCACAATGCTGTCTTACAAAACACGTGTTCAAGATTAGTAAGCAGTACCTTGCTAACGTTTCACTGAAGATCAATGTCAAGATGGGTGGTAGGAACACTGTTCTTCTAGATGCCATCAGCTGCAGGATACCGCTTGTGAGTGACATACCAACGATAATATTTGGAGCGGACGTGACCCATCCAGAGAACGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTTGTAGCCTCTCAGGATTGGCCTGAAGTGACGAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGACTTGTATAAAACTTGGCAGGATCCCGTCCGTGGCACTGTCAGTGGTGGCATGATCAGGGATCTTCTGATTTCCTTTAGGAAAGCAACAGGGCAAAAGCCTCTAAGAATAATATTTTACAGGGATGGCGTAAGTGAAGGACAATTCTATCAAGTATTACTTTATGAGTTGGATGCAATCAGGAAGGCATGTGCATCTTTAGAGCCGAATTACCAACCACCCGTAACGTTCATTGTTGTACAAAAACGACACCACACCCGATTGTTTGCCAACAACTACAGAGATCGAAGTAGCACAGACAAGAGTGGAAACATTTTGCCTGGTACTGTTGTTGACTCCAAAATATGCCACCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATCCAGGGTACAAGTCGGCCAGCTCACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCAGATGGAATTCAGTCGTTAACGAACAACCTTTGCTACACATATGCCAGGTGTACACGTTCGGTTTCTGTTGTTCCTCCAGCATACTATGCACACTTAGCAGCATTCCGAGCTCGATTCTACATGGAACCAGAGATGCAAGAGAATGGCTCGGGTGGTCGTTCTGCCAAGAGTACACGCGCTACCGGAGAGACTGGGGTTCGTCCTTTGCCAGCTCTAAAGGAAAATGTGAAGAGAGTAATGTTCTACTGTTAG | 2979 | 44.14 | MPVRQMKESSEQHLVIKTHLQNTVQKAPKSTQNGKGPPNLEQQNIKSRNPSSPPSKNRGRRRSRGGRKSDQGEVCMRPSSRPCTVALKPDGPEITAGALVATVNPNPNGGNICGMEMGFRNSSKSVSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVPSRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFNIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQFVLLWQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSGGRSAKSTRATGETGVRPLPALKENVKRVMFYC | 992 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 39701497 | 39710033 | - | Maker00031715 | Lcy11g1589 | 647490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g1589 | 992 | Pfam | Piwi domain | 631 | 950 | IPR003165 | GO:0003676(InterPro) | |
Lcy11g1589 | 992 | SMART | Piwi_a_2 | 630 | 951 | IPR003165 | GO:0003676(InterPro) | |
Lcy11g1589 | 992 | Pfam | Argonaute linker 1 domain | 284 | 334 | IPR014811 | - | |
Lcy11g1589 | 992 | SMART | DUF1785_2 | 283 | 335 | IPR014811 | - | |
Lcy11g1589 | 992 | CDD | PAZ_argonaute_like | 335 | 449 | - | - | |
Lcy11g1589 | 992 | SUPERFAMILY | Ribonuclease H-like | 618 | 951 | IPR012337 | - | |
Lcy11g1589 | 992 | Pfam | Argonaute linker 2 domain | 477 | 528 | IPR032472 | - | |
Lcy11g1589 | 992 | Pfam | PAZ domain | 362 | 466 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lcy11g1589 | 992 | Gene3D | - | 699 | 992 | IPR036397 | GO:0003676(InterPro) | |
Lcy11g1589 | 992 | MobiDBLite | consensus disorder prediction | 955 | 974 | - | - | |
Lcy11g1589 | 992 | Pfam | N-terminal domain of argonaute | 140 | 274 | IPR032474 | - | |
Lcy11g1589 | 992 | FunFam | protein argonaute 10-like | 699 | 992 | - | - | |
Lcy11g1589 | 992 | Gene3D | paz domain | 329 | 454 | - | - | |
Lcy11g1589 | 992 | ProSiteProfiles | PAZ domain profile. | 337 | 450 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lcy11g1589 | 992 | ProSiteProfiles | Piwi domain profile. | 630 | 951 | IPR003165 | GO:0003676(InterPro) | |
Lcy11g1589 | 992 | FunFam | Protein argonaute-2 | 329 | 455 | - | - | |
Lcy11g1589 | 992 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 131 | 957 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Lcy11g1589 | 992 | CDD | Piwi_ago-like | 500 | 950 | IPR045246 | - | |
Lcy11g1589 | 992 | SUPERFAMILY | PAZ domain | 330 | 485 | IPR036085 | GO:0005515(InterPro) | |
Lcy11g1589 | 992 | MobiDBLite | consensus disorder prediction | 21 | 54 | - | - | |
Lcy11g1589 | 992 | MobiDBLite | consensus disorder prediction | 21 | 84 | - | - | |
Lcy11g1589 | 992 | Gene3D | - | 520 | 693 | - | - | |
Lcy11g1589 | 992 | FunFam | Argonaute 10 | 520 | 693 | - | - | |
Lcy11g1589 | 992 | SMART | PAZ_2_a_3 | 340 | 472 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Lcy11g1589 | 992 | Pfam | Mid domain of argonaute | 539 | 616 | IPR032473 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1589 | Lcy-Chr11:39701497 | Lcy5g2573 | Lcy-Chr5:48432559 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g1589 | K11593 | - | csv:101221352 | 1905.18 |