Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g1662 | ATGACTCAACAACTAGGAGTGCTAAGTGCACTCGATCTCGCCAAGACCCAATGGTACCATTTCACGGCCATCATCATCGCCGGAATGGGGTTCTTTACCGACGCCTACGATCTCTTCTGCATCGCCGTCGTTTCGAAGTTGATCGGTCGCATATACTACTACACTCCGGGCTCCAGCAGGCCTGGATCGCTTCCTCCGAACGTCACGGCCGCCGTGAGCGGCGTCGCGCTGTGTGGAACTCTGGCCGGGCAGCTCTTCTTCGGGTGGCTTGGTGACAAGTTGGGTAGGAAGAAAGTGTATGGTATAACGTTGATTCTTATGGTGATTTGTTCGTTTGGGTCAGGGCTCAGTTTTGGGCACTCGGCCAAAGCAACAATGACCACTTTATGCCTATTTCGATTCTGGCTTGGCTTTGGGATTGGTGGTGATTACCCACTTTCGGCCACTATTATGTCTGAATATGCAAACAAGAAAACTCGTGGGGCTTTTATTGCGGCCGTCTTTGCTATGCAAGGATTTGGAATTTTGGCCGGTGGGATCGTAGCTTTGATTGTTTCAGCTGCATTCAACAACAGATTCTCAGCTCCCTCATACGAGGCGGACCCAATCGGCTCGACCGTACCGGAGGCCGACTACGTATGGCGCGTAGTTCTAATGTTCGGCGCCATCCCCGCAGGTCTAACATACTATTGGCGCATGAAAATGCCGGAAACCGCTCGGTACACCGCGCTGGTAGCCAAGAACGCCAAACAAGCCGCCGTGGACATGTCCAAGGTCTTACAAGTGGAGCTCGAGGTCGAGGAGGAGAAGCTGGAGAAAATCGTCACCAAAGACAAAAACAACTTCGGATTATTTTCCAAACAGTTCCTCAGACGACACGGCCTCCACTTGCTCGGAACCACCAGCACTTGGTTCTTGCTGGACATCGCCTTTTACAGCCAAAACCTCTTCCAAAAAGACATCTTCACCGGAATCGGGTGGCTTCCCCCAGCAAAGACCATGAGCGCTCTCGAAGAGTGCTTCAGAATCGCCAGAGCCCAGACGCTGATCGCGCTTTTTGGGACTGTGCCGGGGTATTGGTTCACCGTGTTTCTGATCGACATCATCGGAAGATTCACCATCCAGTTGCTCGGTTTCATAATGATGACTATTTTCATGTTTGCTCTTGCGTTGCCTTATAACCATTGGAAGAATCACAACCACGCTGGGTTTTTGGCCATGTACTCCTTGACCTTCTTCTTCGCCAATTTTGGGCCGAATTCCACCACTTTCATTGTTCCAGCTGAAATCTTCCCTGCCAGGCTCCGGTCCACGTGTCACGGGATCTCCGCCGCCGCTGGTAAGGCCGGAGCAATCATTGGGGCATTTGGGTTTCTATATGCAGCACAAAGTACGGACCCAACGAAAACCGACCCAGGTTACCCAGCCGGTATTGGTATTAAGAACTCTCTCATTGCACTGGGTTGCATCAACTTTCTCGGCGGTTTGCTTACGTTGTTGGTGCCGGAACCTAAAGGAAAATCACTCGAGGAGTTGACCGGCGAGAACGAGGTGGCCGAGGAAGGCGGCCAACCGTCCAATAGAACAGTACAGGTGTGA | 1599 | 51.97 | MTQQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLIGRIYYYTPGSSRPGSLPPNVTAAVSGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVICSFGSGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFSAPSYEADPIGSTVPEADYVWRVVLMFGAIPAGLTYYWRMKMPETARYTALVAKNAKQAAVDMSKVLQVELEVEEEKLEKIVTKDKNNFGLFSKQFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTGIGWLPPAKTMSALEECFRIARAQTLIALFGTVPGYWFTVFLIDIIGRFTIQLLGFIMMTIFMFALALPYNHWKNHNHAGFLAMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQSTDPTKTDPGYPAGIGIKNSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEVAEEGGQPSNRTVQV | 532 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 40474248 | 40477335 | + | Maker00032175 | Lcy11g1662 | 647563 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g1662 | 532 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 511 | - | - | |
Lcy11g1662 | 532 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 506 | IPR020846 | GO:0022857(InterPro) | |
Lcy11g1662 | 532 | NCBIfam | phosphate:H+ symporter | 11 | 515 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Lcy11g1662 | 532 | CDD | MFS_PhT | 24 | 505 | - | - | |
Lcy11g1662 | 532 | FunFam | Inorganic phosphate transporter 1-6 | 19 | 527 | - | - | |
Lcy11g1662 | 532 | Pfam | Sugar (and other) transporter | 25 | 512 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lcy11g1662 | 532 | Gene3D | MFS general substrate transporter like domains | 270 | 529 | IPR036259 | - | |
Lcy11g1662 | 532 | Gene3D | MFS general substrate transporter like domains | 19 | 266 | IPR036259 | - | |
Lcy11g1662 | 532 | SUPERFAMILY | MFS general substrate transporter | 11 | 512 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1662 | Lcy-Chr11:40474248 | Lcy12g2120 | Lcy-Chr12:42491286 | 2.31E-292 | dispersed | |
Lcy11g1662 | Lcy-Chr11:40474248 | Lcy11g1663 | Lcy-Chr11:40497617 | 3.47E-283 | tandem | |
Lcy11g1662 | Lcy-Chr11:40474248 | Lcy12g2119 | Lcy-Chr12:42485577 | 2.64E-290 | wgd | |
Lcy11g1662 | Lcy-Chr11:40474248 | Lcy13g0374 | Lcy-Chr13:4260426 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g1662 | K08176 | - | csv:101213007 | 939.102 |