Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g1663 | ATGGCAGGAGAGCAACTGCAAGTACTGAACGCACTGGATGTTGCCAAAACCCAATGGTACCATTTCACAGCGATTGTAATAGCCGGAATGGGCTTTTTCACAGACGCCTATGATCTCTTCTGCGTCTCTCTCGTTACCAAATTGTTGGGCCGAATTTACTATCACCAAGAAGGCTCAGAGAAGCCTGGTGAATTGCCTTCAAATGTCGCCGCCGCCGTCAACGGCGTCGCTTTCTGTGGAACCCTCTCCGGCCAGCTCTTCTTCGGCTGGCTCGGTGACAAAATGGGCCGCAAACGAGTCTACGGTATGACCCTTATGATTATGGTCATTTGCTCTGTTGCTTCAGGCCTTTCTTTCAGCAGCACTCCCACGTCCGTGGTCGCCACTCTTTGCTTCTTCCGATTCTGGCTCGGCTTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACAAGGGGGGCATTTATCGCCGCCGTGTTTGCGATGCAGGGGTTTGGGATTCTCGCTGGAGGCGTTGTGGCTATAATTGTCTCCGCCGCTTTCGACGCCAAATACCCAGCTCCGTCGTACGAGCAAAATGCCGCCGCCTCCACCGTCCCACAGGCGGATTACGTGTGGAGAATCATTGTGATTTTTGGTGCTTTTCCTGCTCTGCTCACTTACTACTGGCGAATGAAAATGCCTGAAACTGCCCGCTACACCGCCTTGGTTGCTAAAAACGCCAAACAGGCGGCGGCCGACATGTCTAAAGTGCTGCAGGTCGAATTGGAATCCGAGCAGGAGAAAATCGACGAGGGGAAATCGAAGAACGATTTTGGGTTGTTTTCGATGAGCTTTGTTCGTCGTCACGGGCTTCACTTGCTCGGAACCACCTCCACTTGGTTCTTGTTGGACATAGCCTTTTACAGTCAGAATCTCTTTCAGAAGGACATCTTCACTGCAATTGGTTGGCTTCCTCCAGCCAAGACGATGAACGCCATTGAAGAGGTCTTCAGAATCGCCAGAGCTCAAACTCTAATAGCACTATGCAGTACAGTTCCAGGGTATTGGTTCACGGTGGCGTTGATCGACGTAATGGGCCGCTTCGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTGTTCATGTTCGCACTGGCCATTCCGTACAAGCACTGGACTCTGGAAGCCAACAGAATCGGGTTTGTCGTGATGTATTCGCTGACGTTCTTCTTCGCGAACTTCGGGCCAAACGCCACCACTTTCGTGGTTCCGGCGGAGATTTTCCCGGCGAGGCTCCGATCGACGTGCCATGGAATATCGGCGGCGTCTGGAAAAGCAGGGGCGATCGTGGGAGCGTTTGGATTTCAGTATGCGGAGAAGGGGCTGGGAGTGAAGAAGACATTGATAATTCTGGGCGTTGTGAATGCTCTTGGAATGTTCTTCACTTTGTTGGTTCCTGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCCGGTGAAGCTGGAGATGAGGTTGAAAGCAAAACAGAGACGAGGGCTCAATCTGATCACAGAACTATGCCTGTTTGA | 1575 | 51.49 | MAGEQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHQEGSEKPGELPSNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMIMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKYPAPSYEQNAAASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNDFGLFSMSFVRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAIEEVFRIARAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGLGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEVESKTETRAQSDHRTMPV | 524 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 40497617 | 40499191 | + | Maker00032104 | Lcy11g1663 | 647564 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g1663 | 524 | MobiDBLite | consensus disorder prediction | 497 | 524 | - | - | |
Lcy11g1663 | 524 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 498 | - | - | |
Lcy11g1663 | 524 | FunFam | Inorganic phosphate transporter 1-6 | 20 | 514 | - | - | |
Lcy11g1663 | 524 | CDD | MFS_PhT | 25 | 492 | - | - | |
Lcy11g1663 | 524 | Pfam | Sugar (and other) transporter | 26 | 500 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lcy11g1663 | 524 | Gene3D | MFS general substrate transporter like domains | 20 | 517 | IPR036259 | - | |
Lcy11g1663 | 524 | SUPERFAMILY | MFS general substrate transporter | 12 | 500 | IPR036259 | - | |
Lcy11g1663 | 524 | NCBIfam | phosphate:H+ symporter | 11 | 502 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Lcy11g1663 | 524 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 493 | IPR020846 | GO:0022857(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1663 | Lcy-Chr11:40497617 | Lcy12g2119 | Lcy-Chr12:42485577 | 3.04E-294 | dispersed | |
Lcy11g1662 | Lcy-Chr11:40474248 | Lcy11g1663 | Lcy-Chr11:40497617 | 3.47E-283 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g1663 | K08176 | - | csv:101209582 | 949.118 |