Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1663 ATGGCAGGAGAGCAACTGCAAGTACTGAACGCACTGGATGTTGCCAAAACCCAATGGTACCATTTCACAGCGATTGTAATAGCCGGAATGGGCTTTTTCACAGACGCCTATGATCTCTTCTGCGTCTCTCTCGTTACCAAATTGTTGGGCCGAATTTACTATCACCAAGAAGGCTCAGAGAAGCCTGGTGAATTGCCTTCAAATGTCGCCGCCGCCGTCAACGGCGTCGCTTTCTGTGGAACCCTCTCCGGCCAGCTCTTCTTCGGCTGGCTCGGTGACAAAATGGGCCGCAAACGAGTCTACGGTATGACCCTTATGATTATGGTCATTTGCTCTGTTGCTTCAGGCCTTTCTTTCAGCAGCACTCCCACGTCCGTGGTCGCCACTCTTTGCTTCTTCCGATTCTGGCTCGGCTTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACAAGGGGGGCATTTATCGCCGCCGTGTTTGCGATGCAGGGGTTTGGGATTCTCGCTGGAGGCGTTGTGGCTATAATTGTCTCCGCCGCTTTCGACGCCAAATACCCAGCTCCGTCGTACGAGCAAAATGCCGCCGCCTCCACCGTCCCACAGGCGGATTACGTGTGGAGAATCATTGTGATTTTTGGTGCTTTTCCTGCTCTGCTCACTTACTACTGGCGAATGAAAATGCCTGAAACTGCCCGCTACACCGCCTTGGTTGCTAAAAACGCCAAACAGGCGGCGGCCGACATGTCTAAAGTGCTGCAGGTCGAATTGGAATCCGAGCAGGAGAAAATCGACGAGGGGAAATCGAAGAACGATTTTGGGTTGTTTTCGATGAGCTTTGTTCGTCGTCACGGGCTTCACTTGCTCGGAACCACCTCCACTTGGTTCTTGTTGGACATAGCCTTTTACAGTCAGAATCTCTTTCAGAAGGACATCTTCACTGCAATTGGTTGGCTTCCTCCAGCCAAGACGATGAACGCCATTGAAGAGGTCTTCAGAATCGCCAGAGCTCAAACTCTAATAGCACTATGCAGTACAGTTCCAGGGTATTGGTTCACGGTGGCGTTGATCGACGTAATGGGCCGCTTCGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTGTTCATGTTCGCACTGGCCATTCCGTACAAGCACTGGACTCTGGAAGCCAACAGAATCGGGTTTGTCGTGATGTATTCGCTGACGTTCTTCTTCGCGAACTTCGGGCCAAACGCCACCACTTTCGTGGTTCCGGCGGAGATTTTCCCGGCGAGGCTCCGATCGACGTGCCATGGAATATCGGCGGCGTCTGGAAAAGCAGGGGCGATCGTGGGAGCGTTTGGATTTCAGTATGCGGAGAAGGGGCTGGGAGTGAAGAAGACATTGATAATTCTGGGCGTTGTGAATGCTCTTGGAATGTTCTTCACTTTGTTGGTTCCTGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCCGGTGAAGCTGGAGATGAGGTTGAAAGCAAAACAGAGACGAGGGCTCAATCTGATCACAGAACTATGCCTGTTTGA 1575 51.49 MAGEQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHQEGSEKPGELPSNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMIMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKYPAPSYEQNAAASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNDFGLFSMSFVRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAIEEVFRIARAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGLGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEVESKTETRAQSDHRTMPV 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 40497617 40499191 + Maker00032104 Lcy11g1663 647564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1663 524 MobiDBLite consensus disorder prediction 497 524 - -
Lcy11g1663 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 498 - -
Lcy11g1663 524 FunFam Inorganic phosphate transporter 1-6 20 514 - -
Lcy11g1663 524 CDD MFS_PhT 25 492 - -
Lcy11g1663 524 Pfam Sugar (and other) transporter 26 500 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy11g1663 524 Gene3D MFS general substrate transporter like domains 20 517 IPR036259 -
Lcy11g1663 524 SUPERFAMILY MFS general substrate transporter 12 500 IPR036259 -
Lcy11g1663 524 NCBIfam phosphate:H+ symporter 11 502 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Lcy11g1663 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 493 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1663 Lcy-Chr11:40497617 Lcy12g2119 Lcy-Chr12:42485577 3.04E-294 dispersed
Lcy11g1662 Lcy-Chr11:40474248 Lcy11g1663 Lcy-Chr11:40497617 3.47E-283 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1663 K08176 - csv:101209582 949.118