Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1817 GAAAGAAAAACTGGAGTTCTAATTCTTTTTGTTTTTTCTTCCTTCCCTTTCTGTATTTGGTTTAGTTTTAAGCAGTCCAACGGCGCACAACACGCACGGAAATCTAGGGCTGATGTATCGTCTGTAAATTCTACCGTTTCGACTAACCCTCGCGGAGGACAAAACGGTTCTCATGTGCAGCTGCAACAGAATGGTTCATCATCCAATCCAATTAAATTGTCAGGATCCCAGAACGGGATTATTGAAAAAAATGCAACTTCTCAAACCACCTCAAAGACTTCTGTTGCATTTTCAGAATGCAAGAGCGGGATTGTTCAAAATAATGCAACCTCTAAACCTACCTCAAAAACTTCTGACACCAATATATCCTCAACCCCCTTTAAAGACTTGGGAGAACAGCATAAAATATTTCCACTTCAATTTGGATCACTAGGCCCTGGTTTCCAGGTGTTCCATCCATTCTATGCTTATTTAATGCCTTGGACCAGCTCAGCTCCTTCGAATCTGGAAGGACAGATATTGACCCAGGCACAATGCCATTTGTTTAAATCTGTACCTTCAGGGTCTGTGCTGCCAGTACCCAGGCAACCAATGGCAAAAAATGATTCCAGCGTCTGTGATCAACCAAATATGGGAAAGTTCAATTCAGAGCCTGAGATCAAAAGGGAGACGCAAGTCTCAGCAGGAGCAACCTTAAAACAGAATCAGAATCCTTCCCATGTATCATTCATTAGTCACAGAGCTTCTGTTTCCCTCCCCAAGAGTACGAGCCTGGCTCATCATGTTGCTAATTCACCTAATATGAACGAAATCCAAGTTCATGACGCGGCCTCTGCTTCCTCAGCAGCGAAGCATGTAGCAATTCAGCCTCCTCCTGGGTCTTTGACGCAGGTCATTGACTCATGTCCAAAAGAAAGGCTGTCTTGCTCTAACTTAAATAAAGCTAATAACAAGGTCTCTTTTCATATGAGTCAAGATCTTGCTTCTCAAACTCGTACTAGTTATCCAGATGGTGAAGTTTCTGAAACCGTACAAGCTTCAGAATCAAATGTTGCAGAGAGAGGAAGCTCATCTACTTCAAATGAAGTTAGTGTTGAGGTTTCAGATCCCATTTGTTATTCTAAGCTGGAGTCCTCTTTGCAAATTGAGCAATCAAAACATGAGCTTGTAGGAGCGAAAAGATTGCTCGTTTCTAGAGATGACATGGAACAAAGTAAACCTCCATCTCCATCTTGTATGAAGTCGATATCAATTAATAATGGCAATTTAAACTCCAGAACACTCGAGGAATGGGATGAACCTGTAAGCTCTCATGCAGAAGTTGACAGTACAAAAGACAATAACGTTCTTTCCAACTCCATAACTCATGGATATAAGACTTCACTTGTTATTGCATCTTCTTGTCGAAGCAATAGTAACAACAATACTGAAGTGAGCCGAGCTGATCTGCAGTCAGCTTCTGGTCAGACATCTGAGTTCTCAGAGATGAAGCATGAAGGGGATAGATTAGCGCACGCGGGTTTTCAGTGTGACCCTATTCTTATACCAATTGTCGAGGATAAACCTGTTATGGACATAAACAAGATGAGAAATACTTCTACAAGAGGGAAGAATAAGAGAAAGGAAATTCTTCAGAAGGCAGATGCTGCTGGGACTAATTCTGACCTTTATATGGCATATAAAGAACCTGAAGTAAAGAAAGAGACTGTCTTGTCTGCGGAAAGCTTCAATGGGAGCTTAAATATGAAACACGAGTCTGCTGGTTCCATCATGGAAGAGGCTGTCTTGACCAAGAAGGAAATTCAGGGTAAACTAGTGCTAGATGATTGGGAAGATGCAACCGATATTTCTACTGTTAAATTGAAATACGAGGGTTTTGAGGAAAAGGCCAAAGGAAAAGTAGCACTAGACCACGAGGTCGGGAGTGGAGATCTGGCCAAAAAGTACTCCAGAGATTTCCTCCTCAAATTTGCAGAGCAGTTCATGGACCTTCCCGATGGGTTTGAAATTACTCCCAGCATAAAGGGTCTAATGAGTATTAACCATGGCTCTCATTCGATTAATAATAATTCACCTTTGAATCTTGAAAAGCCAAGTGGAGGGTCTCGACGAGACCATCGTGCTATTACTGTTGATGACAAACTATTTGCTTCAGGGCGGGATTCACACCTGGATAGCACTCGACCTACCCAAGGTCTTAACAATGGTGCTTTAAAGAACCCAAGGGCACACGTAGGTTCTCAGGGAAAGATTCAAAGAAATGGCTCCAATTCTGATAGATGGCAAAGAGATACCAATTTTCAGCTGAAAGGTTTGATTTCTCCTCCAACTCCATTACAGATGATGCACAGAGCGGAGAAGAAGTATGAAGTGGGTAAAGCGGCCGACGAGGAAGAGACCAAACAAAGGCAGCTGAAGGCCATACTGAACAAGCTAACTCCACAAAATTTTGAAAAACTCTTTGAACAAGTGAAAGCAGTTAATATTGATAGTTCTAAGACACTAAGTGGTGTCATCTCGCAGATCTTTGACAAAGCTTTGATGGAGCCTACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATCTGGCTGGCGAGTTACCTGATTTTAGCGATGATAACCAGAAGATTACTTTTAAGAGGTTGCTTTTGAACAAGTGCCAGGAGGAATTTGAGAGAGAGCAGGAAGAAAATGATGAAGTCAATAAGGTCAGTGAGATGAAACAGTCTGCAGAGGAACGAGAAGCGAAGAGAATACAGGCACGCAAAAGAATGCTAGGCAACATCAGATTAATTGGGGAACTTTACAAAAAAAAGATGATAACAGAGAAAATCATGCATGTATGCATCAAGAAGTTGTTGGGTCAATATCAGAATCCTGATGAGGAAGATATTGAAGCATTGTGCAAATTGATGAGCACCATAGGAGAGATGATAGATCACCCCAAAGCTAAGGAGCACATGGATGCATACTTTGAGATGATGACTAAATTATCTAACAACATGAAGCTGTCATCCAGGGTTAGATTCATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAATGGCAACAGAGGAGAAAAGTCGAAGGGCCCAAAAAAATTGATGAAGTGCATAGGGATGCTGTGCAAGAACGTCAAGCACAAGCTAGTAGATTAGGCCGTGGTCCAGGAAGCCATGCACAATTGAGGAGAGGAACATCCATGGATTTTGGTTCTCGACCGTCTGCATTATTGCCTTCTCCTAATGCCCAGGCTGGTGGTTTTCTCGGTTTTCCAACCCAGGTTTGTGGTTCAGCCAGTCAGGACGCTCGTTTTGAAGGTAAACAACAGTCTTGTGAGGCCAAGGCAAGCCCAAGTCTATTGCCCCAAAGACCTATTAGTGATGATTCCATCACTTTGGGTCCCCAGGGTAGTTTAGCTAGAGGAATGTCCATTAGAGGACCACGATCCATTTCATCCGCTTCATTAGCAGATTCGTCCTTACCAATTGGTAATAACTCCCAAAGAATGACGGCTGTTTTAAGTTCTCATGGCTCAGTATCAGAGCATGCAACTTCCAACTCCCGAGGGGACATCAATTCAAGAAATTTGTCAAAGGGATTTGTCGGTTCAGTATCTCTGGATCAAGCGACGCGTACACCGGAACCTGGTATTACTAATGGACAGGCAGCTTTGACACCGAATGGTCATTCTGAAGCCATGTCCAAAGAACTCCAAGATAAGTCCATAGCAGCGATTCGGGAATATTACAGTGCTCGAGATGAGAAGGAAGTTACTCTGTGCATCAAGGACTTGAATTCACCTGGATTCCATTCATCCATGATTTCTCTTTGGATCACAGACTCATTTGAGAGAGAAAACATAGAAAGGGATCTTTTGGCTAAACTTCTTGTTAGCCTCGCCAAATCGAAGGATGGTACATTGACTCAAGTCCAACTTGTCAAAGGAATCCAAAGTGTTCTGGCCACTATGGAGGATGCTGTAAATGATGCCCCAAAAGCTCCAGAATTTATGGGGCGATTACTCGCAAACTTGATCTGTGAAAACTTGATTTCATTGAAAGAAATGGGCAAGTTTATATATGAAGGTGGAGAGGAGCCTGGAAGTCTTGTACAAGCTGGCCTTGCAGCTGATGTTCTTGGTAACGTGCTGGAGGCAGTTCAATTGGTGAAAGGTCAGATTTTTGTCAGCGAGATTCTTAAAACTTCTAATCTACAATTGGAAAGATTTCGCCCTTCATACCCAATCAAATCAGCAAAGTTAGAGAAGTTTATTTAG 4281 42.28 ERKTGVLILFVFSSFPFCIWFSFKQSNGAQHARKSRADVSSVNSTVSTNPRGGQNGSHVQLQQNGSSSNPIKLSGSQNGIIEKNATSQTTSKTSVAFSECKSGIVQNNATSKPTSKTSDTNISSTPFKDLGEQHKIFPLQFGSLGPGFQVFHPFYAYLMPWTSSAPSNLEGQILTQAQCHLFKSVPSGSVLPVPRQPMAKNDSSVCDQPNMGKFNSEPEIKRETQVSAGATLKQNQNPSHVSFISHRASVSLPKSTSLAHHVANSPNMNEIQVHDAASASSAAKHVAIQPPPGSLTQVIDSCPKERLSCSNLNKANNKVSFHMSQDLASQTRTSYPDGEVSETVQASESNVAERGSSSTSNEVSVEVSDPICYSKLESSLQIEQSKHELVGAKRLLVSRDDMEQSKPPSPSCMKSISINNGNLNSRTLEEWDEPVSSHAEVDSTKDNNVLSNSITHGYKTSLVIASSCRSNSNNNTEVSRADLQSASGQTSEFSEMKHEGDRLAHAGFQCDPILIPIVEDKPVMDINKMRNTSTRGKNKRKEILQKADAAGTNSDLYMAYKEPEVKKETVLSAESFNGSLNMKHESAGSIMEEAVLTKKEIQGKLVLDDWEDATDISTVKLKYEGFEEKAKGKVALDHEVGSGDLAKKYSRDFLLKFAEQFMDLPDGFEITPSIKGLMSINHGSHSINNNSPLNLEKPSGGSRRDHRAITVDDKLFASGRDSHLDSTRPTQGLNNGALKNPRAHVGSQGKIQRNGSNSDRWQRDTNFQLKGLISPPTPLQMMHRAEKKYEVGKAADEEETKQRQLKAILNKLTPQNFEKLFEQVKAVNIDSSKTLSGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSDDNQKITFKRLLLNKCQEEFEREQEENDEVNKVSEMKQSAEEREAKRIQARKRMLGNIRLIGELYKKKMITEKIMHVCIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIDEVHRDAVQERQAQASRLGRGPGSHAQLRRGTSMDFGSRPSALLPSPNAQAGGFLGFPTQVCGSASQDARFEGKQQSCEAKASPSLLPQRPISDDSITLGPQGSLARGMSIRGPRSISSASLADSSLPIGNNSQRMTAVLSSHGSVSEHATSNSRGDINSRNLSKGFVGSVSLDQATRTPEPGITNGQAALTPNGHSEAMSKELQDKSIAAIREYYSARDEKEVTLCIKDLNSPGFHSSMISLWITDSFERENIERDLLAKLLVSLAKSKDGTLTQVQLVKGIQSVLATMEDAVNDAPKAPEFMGRLLANLICENLISLKEMGKFIYEGGEEPGSLVQAGLAADVLGNVLEAVQLVKGQIFVSEILKTSNLQLERFRPSYPIKSAKLEKFI 1426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41937420 41944293 - Maker00032046 Lcy11g1817 647718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1817 1426 Gene3D - 1231 1426 - -
Lcy11g1817 1426 SUPERFAMILY ARM repeat 795 1024 IPR016024 -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 699 721 - -
Lcy11g1817 1426 Pfam MIF4G domain 803 1022 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 1108 1135 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 32 77 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 1173 1198 - -
Lcy11g1817 1426 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 333 1415 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 687 762 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 1045 1085 - -
Lcy11g1817 1426 Gene3D - 802 1035 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 1210 1229 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 723 737 - -
Lcy11g1817 1426 Pfam MA3 domain 1240 1351 IPR003891 -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 107 127 - -
Lcy11g1817 1426 FunFam Eukaryotic translation initiation factor 4G 802 1035 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 747 762 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 1108 1157 - -
Lcy11g1817 1426 SMART ma3_7 1239 1353 IPR003891 -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 327 363 - -
Lcy11g1817 1426 MobiDBLite consensus disorder prediction 894 915 - -
Lcy11g1817 1426 ProSiteProfiles MI domain profile. 1238 1362 IPR003891 -
Lcy11g1817 1426 FunFam Eukaryotic translation initiation factor 4G 1233 1425 - -
Lcy11g1817 1426 SMART if4_15 802 1022 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Lcy11g1817 1426 SUPERFAMILY ARM repeat 1236 1416 IPR016024 -
Lcy11g1817 1426 Coils Coil 884 914 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1817 Lcy-Chr11:41937420 Lcy2g0190 Lcy-Chr2:1486801 1.66E-53 dispersed
Lcy11g1817 Lcy-Chr11:41937420 Lcy13g0520 Lcy-Chr13:6442722 1.51e-310 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1817 K03260 - csv:101222372 1828.14