Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1822 ATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGTCCTCTTCTCTCTGCAAGGACTAGATCCTTCTCCACCGATCTGCCGGCGGCTGCGGCTCCCGACGATGCCTTCGTCGCCGCCTGGAAGAAGGTGATCCCTAATATTGAGCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCCGCTACGCCTTCTTCCATCCCCAGTAAGCTCACTGTCAACTTCGTTCTTCCCTATGCTTCCGAGCTCTCGGCCAAAGAGGTGTTGAATCTTGTGTGGGAAATAATCGACGTAAATAAGCATTTCGATTCCATGGTTACAAATGCTGAACTGGAAATGGATTCTATCCGACTCAGGTCGCAGGAAGCCTACGGTGCTATGATTAAAGATGCAAATTGCAATGGAACCCAAAGTTTGCAGTCAGATTATTCATTGCCCTTCTTTAAAACTCTTTTCTTCTCCCCCCACTCTGAACAGGTTGACATGGTAATAATTCCAGCTACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCAGAGTTGAAGCCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCCGTCGAAGCTGTGCCTGTAGACCAAATCGACGCCAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCTACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGACGTGCACAGTGCTCTGAATGCTGCCCTTACAGGATAG 819 49.69 MFRRASSLLARPLLSARTRSFSTDLPAAAAPDDAFVAAWKKVIPNIEPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVLNLVWEIIDVNKHFDSMVTNAELEMDSIRLRSQEAYGAMIKDANCNGTQSLQSDYSLPFFKTLFFSPHSEQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41980955 41983170 - Maker00031628 Lcy11g1822 647723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1822 272 CDD F1-ATPase_delta 156 265 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Lcy11g1822 272 Gene3D - 229 271 - -
Lcy11g1822 272 Coils Coil 237 257 - -
Lcy11g1822 272 Hamap ATP synthase epsilon chain [atpC]. 138 260 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Lcy11g1822 272 Gene3D - 147 228 IPR036771 -
Lcy11g1822 272 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 156 213 IPR020546 GO:0015986(InterPro)
Lcy11g1822 272 FunFam ATP synthase subunit delta 229 271 - -
Lcy11g1822 272 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 156 223 IPR036771 -
Lcy11g1822 272 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 26 272 IPR001469 GO:0000275(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(InterPro)|GO:0046933(PANTHER)|GO:0046933(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1822 K02134 - csv:101206104 255.758