Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1838 ATGGAGCAGCAATATCCGCATGGAAGAGGAGCAGATGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACTCACTCTTTGGTCCACACAACGATTTAGTCCTTCTTGAGGTTGATGAAAAGCTTCTGGAAGAAGTTCTTCACGAACGAGTAAGCATCAGAGGACAGCCGGAAGAAGATGCAGTATTCTGCACAAAGTCGAAAACTTATGGAATCAAATATGTAGGAACTTCCAATTCTGTACTCCTCATTCCCCCATCAGGTCGATCAGAATACTATGAAAATGAGCTAGATAGCCATGGGAGTGATAGCACTAAAGAAGTTGCACCTGTTATCAAAGTTGCTCCGGGTATCATGGAACTTGTTGAGATTGCTCCCAGAATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTAGCTGATGAGTGGGAAAGTGAAGAGATGGGCGAAAATGAAAAACGAATCTATAGTTGGGATGATCTTGTAGACAAGGTTCAGGCTAGCGATGATGAATTGAAAGCTGGATTACAAGCACTTTCCGCGGTTGAGATTGATGGCTACTGGAGAGTTGTGGATGAAAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACACATTTTTAAATGACTGGTCTCTGGATGCACTTGATGAAGGTGTAATCATGAAAGTGATGGACATTGATGGTTTTTCTGAAAAACTTGTGCATCATTGTCTCCATGTCTATGGCTATAAATCGGATGGAGATGAGGGGAAAAGTTGTTTATGGAGATTGGACGAGAAACGGGTTTGTGTGCATTTTGCAAGAGAGGTCCTGAAGAATGGAAAGATGAAGCTGGAGAATTTCATGGATGAATGGAGACGAAAAATCCCATTAGGAATGCGTGGCAACTTCGACCTGTTGGAAGGTGAAGTTTTGACCGAGAGGCTCGGTGTTGAGACGTGGGTTCGTGGTTTTAGAGTTTCTTCATTGCCATCAAATCCTGCTGAGTGTTTCTCCATTTTGTTTAGAGAACGACCAAAATGGGAGTGGAAGGATCTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGTCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACGCAACCGAACCCCGAAGCAGAACCTGTGTTCAGTGCAAGATAG 1182 42.89 MEQQYPHGRGADAVLHLQPNSSISIAYHSLFGPHNDLVLLEVDEKLLEEVLHERVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHGSDSTKEVAPVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESEEMGENEKRIYSWDDLVDKVQASDDELKAGLQALSAVEIDGYWRVVDEKYMDSMLQMLLHNTFLNDWSLDALDEGVIMKVMDIDGFSEKLVHHCLHVYGYKSDGDEGKSCLWRLDEKRVCVHFAREVLKNGKMKLENFMDEWRRKIPLGMRGNFDLLEGEVLTERLGVETWVRGFRVSSLPSNPAECFSILFRERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42145746 42148465 + Maker00032067 Lcy11g1838 647739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1838 393 Pfam Sister chromatid cohesion protein Dcc1 38 359 IPR019128 GO:0007064(InterPro)|GO:0031390(InterPro)
Lcy11g1838 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 393 IPR019128 GO:0000775(PANTHER)|GO:0000785(PANTHER)|GO:0007064(InterPro)|GO:0031390(PANTHER)|GO:0031390(InterPro)|GO:0034088(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1838 K11271 - csv:101203202 682.945