Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1848 ATCGTGGGTCGTTTGTCACCCATTCGCTTAGTCGCCGAAAAATGCGCCACCACTCCTGCAATCGCCGCTAAGCTCCTGTGGGCTGCCACCACAAGAAGGAGACATCAACTAGGATCTGCATCAGTGCTGTGGAAACTTGTGGGTCGTGGGTTTTCACCGTCGAGGGTCGAAAACACATCAATCGGAAGGGAGCGTCACGAACTGGAGAATTGTTGGAGGAAAATAGGCATCTTCCTTTTGTTCCTCCATAGCAATATAATTCCTTTTAATTATAATTTTCTTTTGATGGAGGCGAGTTGGGTTTTGGCGGCAGCTGTGACGGCGGCGGCAGCGGTGGCGGGGTTGGCGGTGGTGAAATGGGCGGCGAAGAGCTTCAATGAGTGGATATATGAGGCGAAATTGGGCGACCGGCGGGCGGCTTTGCCGCCGGGGGATTTGGGATGGCCTTATATTGGGAATATGTTGGCTTTCTTTAGAGCCTTCAAGTCTAAGAATCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAACCGGAATCTACAAGGCTCATTTATTTGGAAGCCCTAGCGTGGTCGCGACAACGCCGGAGACATGCCGGAAAGTTTTGACAGACGACGAAGCCTTTCAGCCCGGTTGGCCACGCTCCGCCGTAGAACTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGAGGAGGAACACAAGCGCCTCCGCCGCTTAACCTCTGCTCGAGTGAACGGCTTCGAGGCGCTGAGCAATTACATTCCTTACATCGAACAGAACGTCTTGAAATCGTTGGAGAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACGTTCTCCATTATCATGTACATTTTCCTAGGCACCGAGAGCGAATCGGTAATGGAGGTGTCGGAGAAGGAGTACGCTCAGCTTAATTATGGCATTCGAGCCCTAAAAATTAACCTACCTGGATTTGCTTATTACAAAGCATTCAAGGCTCGGAAGAATCTTGTCGCTGCGTTGCAACAAATTGTGACTGATCGAAGAAACCGAAGATTGAACAAATCGGCGGTGAAGAGGAAGGACATGGTGGACGCTCTGATTGATGTTGAAGATGAAAATATCAGAAAATTGACCGACGAGGAGATCATTGATCTTCTGGTGATGTACTTGAATGCAGGCCATGAATCTTCAAGCCACATCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCCAAGGCAGAACAAGAGGAGATTGTGAGGAGAAGGCCTCCGGGTCAAAAGGGACTGACATTGAAAGAATGCCGGGAAATGACATATCTCTCGAAAGTGGTTGACGAGACTCTTCGCTATATATCATTATCCCTTGTTGTTTTCAGAGAGGCACAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGTTGGAAAGTGATGGCTTGGTTCAGAAGCATTCACTACGACAGTGAAATTTACCCAGATCCAAAGAAATTTGATCCTTCGAGATGGGACGGATTTATACCAAAAGCGGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGTCCAGGAAATGATCTAGCCAAATTGGAGATCACCATTTTCGTCCACCATTTTCTTCTCAATTACAAGCTTGAATGGCTGACTCCTGAATGTCGAATCATGTATCTGCCCCATACAAGGCCAAAGGACAACTGCATCGCGAAAATCAAAAGACACATGCATGGCATCTTGGCTTCTCCTTGTGCCATTGGTAGTGAATTTTGTACTGGAATTCTGCTTGAAAATAAATTAGAAGTTATTGCAGCTTGTTGA 1851 46.89 IVGRLSPIRLVAEKCATTPAIAAKLLWAATTRRRHQLGSASVLWKLVGRGFSPSRVENTSIGRERHELENCWRKIGIFLLFLHSNIIPFNYNFLLMEASWVLAAAVTAAAAVAGLAVVKWAAKSFNEWIYEAKLGDRRAALPPGDLGWPYIGNMLAFFRAFKSKNPETFIDSYVSRFGKTGIYKAHLFGSPSVVATTPETCRKVLTDDEAFQPGWPRSAVELIGKKSFIEMPEEEHKRLRRLTSARVNGFEALSNYIPYIEQNVLKSLEKWSNMGPIEFLTQLRKLTFSIIMYIFLGTESESVMEVSEKEYAQLNYGIRALKINLPGFAYYKAFKARKNLVAALQQIVTDRRNRRLNKSAVKRKDMVDALIDVEDENIRKLTDEEIIDLLVMYLNAGHESSSHIMMWATILLNQHPEVLKKAKAEQEEIVRRRPPGQKGLTLKECREMTYLSKVVDETLRYISLSLVVFREAQMDVNLNGYLIPKGWKVMAWFRSIHYDSEIYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEITIFVHHFLLNYKLEWLTPECRIMYLPHTRPKDNCIAKIKRHMHGILASPCAIGSEFCTGILLENKLEVIAAC 616
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 42285142 42306015 + Maker00031918 Lcy11g1848 647749
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1848 616 FunFam Ent-kaurenoic acid oxidase 132 585 - -
Lcy11g1848 616 PRINTS P450 superfamily signature 525 534 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS P450 superfamily signature 534 545 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS P450 superfamily signature 396 413 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 Gene3D Cytochrome P450 132 586 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 CDD CYP90-like 174 584 - -
Lcy11g1848 616 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 527 536 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy11g1848 616 PRINTS E-class P450 group I signature 385 402 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS E-class P450 group I signature 405 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS E-class P450 group I signature 492 516 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS E-class P450 group I signature 524 534 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PRINTS E-class P450 group I signature 534 557 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 SUPERFAMILY Cytochrome P450 137 584 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1848 616 PANTHER CYTOCHROME P450 26 140 562 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Lcy11g1848 616 Pfam Cytochrome P450 142 559 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1848 Lcy-Chr11:42285142 Lcy6g2199 Lcy-Chr6:46203021 3.78E-151 dispersed
Lcy11g1848 Lcy-Chr11:42285142 Lcy12g1923 Lcy-Chr12:40529280 8.38E-150 wgd
Lcy11g1848 Lcy-Chr11:42285142 Lcy13g0539 Lcy-Chr13:6738728 3.41E-244 wgd
Lcy11g1848 Lcy-Chr11:42285142 Lcy6g2196 Lcy-Chr6:46156809 7.30E-77 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1848 K04123 - csv:101221667 845.884