Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy11g1848 | ATCGTGGGTCGTTTGTCACCCATTCGCTTAGTCGCCGAAAAATGCGCCACCACTCCTGCAATCGCCGCTAAGCTCCTGTGGGCTGCCACCACAAGAAGGAGACATCAACTAGGATCTGCATCAGTGCTGTGGAAACTTGTGGGTCGTGGGTTTTCACCGTCGAGGGTCGAAAACACATCAATCGGAAGGGAGCGTCACGAACTGGAGAATTGTTGGAGGAAAATAGGCATCTTCCTTTTGTTCCTCCATAGCAATATAATTCCTTTTAATTATAATTTTCTTTTGATGGAGGCGAGTTGGGTTTTGGCGGCAGCTGTGACGGCGGCGGCAGCGGTGGCGGGGTTGGCGGTGGTGAAATGGGCGGCGAAGAGCTTCAATGAGTGGATATATGAGGCGAAATTGGGCGACCGGCGGGCGGCTTTGCCGCCGGGGGATTTGGGATGGCCTTATATTGGGAATATGTTGGCTTTCTTTAGAGCCTTCAAGTCTAAGAATCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAACCGGAATCTACAAGGCTCATTTATTTGGAAGCCCTAGCGTGGTCGCGACAACGCCGGAGACATGCCGGAAAGTTTTGACAGACGACGAAGCCTTTCAGCCCGGTTGGCCACGCTCCGCCGTAGAACTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGAGGAGGAACACAAGCGCCTCCGCCGCTTAACCTCTGCTCGAGTGAACGGCTTCGAGGCGCTGAGCAATTACATTCCTTACATCGAACAGAACGTCTTGAAATCGTTGGAGAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACGTTCTCCATTATCATGTACATTTTCCTAGGCACCGAGAGCGAATCGGTAATGGAGGTGTCGGAGAAGGAGTACGCTCAGCTTAATTATGGCATTCGAGCCCTAAAAATTAACCTACCTGGATTTGCTTATTACAAAGCATTCAAGGCTCGGAAGAATCTTGTCGCTGCGTTGCAACAAATTGTGACTGATCGAAGAAACCGAAGATTGAACAAATCGGCGGTGAAGAGGAAGGACATGGTGGACGCTCTGATTGATGTTGAAGATGAAAATATCAGAAAATTGACCGACGAGGAGATCATTGATCTTCTGGTGATGTACTTGAATGCAGGCCATGAATCTTCAAGCCACATCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCCAAGGCAGAACAAGAGGAGATTGTGAGGAGAAGGCCTCCGGGTCAAAAGGGACTGACATTGAAAGAATGCCGGGAAATGACATATCTCTCGAAAGTGGTTGACGAGACTCTTCGCTATATATCATTATCCCTTGTTGTTTTCAGAGAGGCACAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGTTGGAAAGTGATGGCTTGGTTCAGAAGCATTCACTACGACAGTGAAATTTACCCAGATCCAAAGAAATTTGATCCTTCGAGATGGGACGGATTTATACCAAAAGCGGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGTCCAGGAAATGATCTAGCCAAATTGGAGATCACCATTTTCGTCCACCATTTTCTTCTCAATTACAAGCTTGAATGGCTGACTCCTGAATGTCGAATCATGTATCTGCCCCATACAAGGCCAAAGGACAACTGCATCGCGAAAATCAAAAGACACATGCATGGCATCTTGGCTTCTCCTTGTGCCATTGGTAGTGAATTTTGTACTGGAATTCTGCTTGAAAATAAATTAGAAGTTATTGCAGCTTGTTGA | 1851 | 46.89 | IVGRLSPIRLVAEKCATTPAIAAKLLWAATTRRRHQLGSASVLWKLVGRGFSPSRVENTSIGRERHELENCWRKIGIFLLFLHSNIIPFNYNFLLMEASWVLAAAVTAAAAVAGLAVVKWAAKSFNEWIYEAKLGDRRAALPPGDLGWPYIGNMLAFFRAFKSKNPETFIDSYVSRFGKTGIYKAHLFGSPSVVATTPETCRKVLTDDEAFQPGWPRSAVELIGKKSFIEMPEEEHKRLRRLTSARVNGFEALSNYIPYIEQNVLKSLEKWSNMGPIEFLTQLRKLTFSIIMYIFLGTESESVMEVSEKEYAQLNYGIRALKINLPGFAYYKAFKARKNLVAALQQIVTDRRNRRLNKSAVKRKDMVDALIDVEDENIRKLTDEEIIDLLVMYLNAGHESSSHIMMWATILLNQHPEVLKKAKAEQEEIVRRRPPGQKGLTLKECREMTYLSKVVDETLRYISLSLVVFREAQMDVNLNGYLIPKGWKVMAWFRSIHYDSEIYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEITIFVHHFLLNYKLEWLTPECRIMYLPHTRPKDNCIAKIKRHMHGILASPCAIGSEFCTGILLENKLEVIAAC | 616 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 42285142 | 42306015 | + | Maker00031918 | Lcy11g1848 | 647749 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy11g1848 | 616 | FunFam | Ent-kaurenoic acid oxidase | 132 | 585 | - | - | |
| Lcy11g1848 | 616 | PRINTS | P450 superfamily signature | 525 | 534 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | P450 superfamily signature | 453 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | P450 superfamily signature | 534 | 545 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | P450 superfamily signature | 396 | 413 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | Gene3D | Cytochrome P450 | 132 | 586 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | CDD | CYP90-like | 174 | 584 | - | - | |
| Lcy11g1848 | 616 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 527 | 536 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | E-class P450 group I signature | 385 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | E-class P450 group I signature | 405 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | E-class P450 group I signature | 492 | 516 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | E-class P450 group I signature | 524 | 534 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PRINTS | E-class P450 group I signature | 534 | 557 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | SUPERFAMILY | Cytochrome P450 | 137 | 584 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy11g1848 | 616 | PANTHER | CYTOCHROME P450 26 | 140 | 562 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Lcy11g1848 | 616 | Pfam | Cytochrome P450 | 142 | 559 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy11g1848 | Lcy-Chr11:42285142 | Lcy6g2199 | Lcy-Chr6:46203021 | 3.78E-151 | dispersed | |
| Lcy11g1848 | Lcy-Chr11:42285142 | Lcy12g1923 | Lcy-Chr12:40529280 | 8.38E-150 | wgd | |
| Lcy11g1848 | Lcy-Chr11:42285142 | Lcy13g0539 | Lcy-Chr13:6738728 | 3.41E-244 | wgd | |
| Lcy11g1848 | Lcy-Chr11:42285142 | Lcy6g2196 | Lcy-Chr6:46156809 | 7.30E-77 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy11g1848 | K04123 | - | csv:101221667 | 845.884 |