Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g1912 ATGATCGTACTCTCGACTTCTGAATCCATCTTCTTCAGCCAAAAAATCCCCAAAAATTTCTCAAAGAATATCTCCCGCTTCGTGATTCTCTCATCCAATCATTGCGATTCAGCCATGGAAGTGAATTTCAACATCTTCACCGTCGTTTCCATCGCACTACTCACAGTCTCCCTCTTCCTTCTGTCCTTGTTCATTCTCCTCCTCCGAACCCTCGCCGGAAAATCCATTACAAGCTCCGACTACTCCCCGGTGTACGGCACCACCTACGGCCAGGCATTCTACTTCAACAACCTCTACGATCATCTAACGGCGGTGGCGAAGCGGCACCGAACGTTCCGGCTGCTCGCGTCGGCGTACAGCGAGATATACACGGTCGATCCGAGAAACGTCGAGCACGTATTGAAGACGAAATTCGACAAGTACCCGAAAGGAAGCAAAGATCAAGAACTCTGCGGGGATCTGTTTGGAGAGGGAATATTTGCGGTGGATGGAGAGAAGTGGAAGCAGCAGAGGAAATTGGCGAGCTATGAATTCTCGACGAGGGTTCTTAGGGATTTTAGCTGCTCTGTTTTCAGACGAAATGCTGCTAAACTTGTTGGACTTCTTTCCCAGCTTTCCACCTCGGGTCGGGTTTTTGATATCCAGGATTTGCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTCGGGTTCGGCGTGGATTTAGATTGCTTGGAGGAACCAAGCAAAGCTGGGAGCGGCTTCATGAAGGCCTTCGATGATTCTAGCGCTCAGGTTTTTTGGCGCTATATCGATCCTTTTTGGAAATTGAAGAGATTTCTCAACATCGGTTCCGAAGCTTCGTTTAGGAACAACGTAAAAGTAATCGATGCTTTTGTGCACCAGTTGATCAGTGACAGGAGAAAATTGCTTCAGCAACCAAATCTCCACTGTTCTTTATCTCAACTTGATTTTGCTGTTCTTACTGGAGTAAAAGAGATCATTTCTTCGTTGAATTTTGTTTTGAACTTGAAGAAGAATGACAAAGAGGACATACTTTCGAGGTTTCTAATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCGATATCTGAGAGATATAGTTCTTAATTTCATGTTGGCTGGCAAGGATACAAGTGCAGGAACTCTGTCTTGGTTCTTCTACATGCTATGCAAGAACCCCTTAATACAGGAAAAAGTTGCAGAAGAAGTGAGACAAATTGTTGGGGTTCAAGGGGAAGAAACTGATATAAATTTGTTCGTACAGAACTTAACTGATTCAGCTCTCGACAAAATGCATTATCTTCATGCAGCACTGGCAGAGACTCTAAGGCTGTATCCTGCTGTCCCTGTGGATGGAAGGACTGCAGAAATAGATGACATTCTTCCTAATGGCCATAAACTAAGAAAAGGGGACAGTGTGTACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCTGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCGCCTTTCAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGGATTTTGCTTATCGACAAATGAAGATAGTATCTGCTGCTCTGCTTCAATTTTTTCGATTCAAATTAGCTGATCCGACTAGAAATATAACTTATAGGATCATGCTCACCCTCCACATCGATGGAGGTCTCCCACTTGTTGCAATTCCAAGAATAAGAAAATTGCACTATGTATTGTAA 1761 44.12 MIVLSTSESIFFSQKIPKNFSKNISRFVILSSNHCDSAMEVNFNIFTVVSIALLTVSLFLLSLFILLLRTLAGKSITSSDYSPVYGTTYGQAFYFNNLYDHLTAVAKRHRTFRLLASAYSEIYTVDPRNVEHVLKTKFDKYPKGSKDQELCGDLFGEGIFAVDGEKWKQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVGLLSQLSTSGRVFDIQDLLMRCSLDSIFKVGFGVDLDCLEEPSKAGSGFMKAFDDSSAQVFWRYIDPFWKLKRFLNIGSEASFRNNVKVIDAFVHQLISDRRKLLQQPNLHCSLSQLDFAVLTGVKEIISSLNFVLNLKKNDKEDILSRFLMESEKDPTRMNDRYLRDIVLNFMLAGKDTSAGTLSWFFYMLCKNPLIQEKVAEEVRQIVGVQGEETDINLFVQNLTDSALDKMHYLHAALAETLRLYPAVPVDGRTAEIDDILPNGHKLRKGDSVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKDFAYRQMKIVSAALLQFFRFKLADPTRNITYRIMLTLHIDGGLPLVAIPRIRKLHYVL 586
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 42827593 42832215 - Maker00031830 Lcy11g1912 647813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g1912 586 PANTHER CYTOCHROME P450 64 571 - -
Lcy11g1912 586 PRINTS E-class P450 group I signature 384 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS E-class P450 group I signature 364 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS E-class P450 group I signature 437 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy11g1912 586 SUPERFAMILY Cytochrome P450 91 578 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 Pfam Cytochrome P450 95 554 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 CDD CYP86A 110 571 - -
Lcy11g1912 586 Gene3D Cytochrome P450 90 578 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS P450 superfamily signature 375 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy11g1912 586 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1912 Lcy-Chr11:42827593 Lcy13g1061 Lcy-Chr13:23713799 1.50E-123 dispersed
Lcy11g1912 Lcy-Chr11:42827593 Lcy11g1915 Lcy-Chr11:42890679 2.17E-171 proximal
Lcy11g1911 Lcy-Chr11:42815816 Lcy11g1912 Lcy-Chr11:42827593 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g1912 - - - 0.0