Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy11g2128 ATGGAGAGGATTCCAGAGTCAAAAGCGCTTCCACTATTACTGCCCATAGAGATGCTTCCAGAATCAAAAGTACGTCCGGGAAAGTTTTGTGTTTTAGATGATATACCAAAAGCACATATGGCCTCTGCCAAGCAAGCTGGCCAATGCCATTGGTCGAACATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGTATTTCAAGATCTAGAAGTTTCTGCACCTGTACGGACATTGAAGGGAAAATCCTCTTTTTTGGGGCAGGAAGAACCTAAACGTGATGCCGCATTAAAGGGTAGTAGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGTGCTAGCCACCCACCAGAGCCCGTGGATATGGATCTTATGAGAACAGTTTATGTACCCATAGGGCAAAATAAACCTGATGCTGGTTGCTTGATGAAGAGTTTTTCAGTGAAGGGCCCTTTTCTTGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGTCCAGCTGTTCTCTCCCCTGCAGAAAGCTTGGTTGATGAACCGCATGACTTGGGTGTTTTGTCTTCCCCCTTTTCAATTCCTCGTGCATCGCAAAATACAGAGACCTCTCTCCTTCCACCAGATTCTGAGGAGAAGGAGTGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTGTTGAAAGAAACTGTGAAAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGACAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATTACAGGAAGCGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACGGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGACAACCAGGGAAACATTTCTCTGAATATGCTGCAAGGTTTTATGCAGCAGAGGTTTTACTGGCACTCGAATATCTTCACATGCTTGGAGTTGTCTATAGGGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTCTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCCTGTATTGAGCCGTCATCAGTTTGCATCCAACCTGCATGCTTTATTCCTCGACTCTTCCCTCAGAAAAGCAAAAAGAAAAGTCCCAAGCCCCGAAGTGATCTGGGGTTGCAATCCAGTACACTTCCCGAGCTGGTAGCAGAGCCTACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCACGAATACCTAGCCCCTGAAATTATTAAAGGAGAGGGTCATGGAAGTGCTGTCGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAAACCCCATTTAAGGGATCGGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAATCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTACTAGTAAAGGAGCCACAGCATCGACTCGGGGTGAAGAGAGGTGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCAGCAGCAGTAAGAGGATGGTGGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 2190 45.57 MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGQCHWSNMHSAKVREVGRSIGQVFQDLEVSAPVRTLKGKSSFLGQEEPKRDAALKGSSNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSVERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSPKPRSDLGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGSSSKRMVGTDVVKSGGQYLDFEFF 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 44806097 44810721 + Maker00032156 Lcy11g2128 648029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy11g2128 729 PANTHER FLIPPASE KINASE 1-RELATED 216 690 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lcy11g2128 729 MobiDBLite consensus disorder prediction 266 310 - -
Lcy11g2128 729 FunFam serine/threonine-protein kinase D6PK-like 564 687 - -
Lcy11g2128 729 FunFam serine/threonine-protein kinase D6PK-like 421 488 - -
Lcy11g2128 729 ProSiteProfiles Protein kinase domain profile. 337 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy11g2128 729 CDD STKc_phototropin_like 335 688 - -
Lcy11g2128 729 SUPERFAMILY Protein kinase-like (PK-like) 319 693 IPR011009 -
Lcy11g2128 729 Gene3D Phosphorylase Kinase; domain 1 335 420 - -
Lcy11g2128 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy11g2128 729 MobiDBLite consensus disorder prediction 266 314 - -
Lcy11g2128 729 Gene3D Transferase(Phosphotransferase) domain 1 564 686 - -
Lcy11g2128 729 Gene3D Transferase(Phosphotransferase) domain 1 421 492 - -
Lcy11g2128 729 MobiDBLite consensus disorder prediction 193 216 - -
Lcy11g2128 729 FunFam Serine/threonine-protein kinase D6PK-like 335 420 - -
Lcy11g2128 729 SMART serkin_6 337 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy11g2128 729 Pfam Protein kinase domain 566 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy11g2128 729 Pfam Protein kinase domain 338 488 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy11g2128 729 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g2128 Lcy-Chr11:44806097 Lcy1g0511 Lcy-Chr1:4446560 1.02E-208 dispersed
Lcy11g2128 Lcy-Chr11:44806097 Lcy5g1341 Lcy-Chr5:31986784 1.90E-228 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65483 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy11g2128 - - - 0.0