Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy11g2128 | ATGGAGAGGATTCCAGAGTCAAAAGCGCTTCCACTATTACTGCCCATAGAGATGCTTCCAGAATCAAAAGTACGTCCGGGAAAGTTTTGTGTTTTAGATGATATACCAAAAGCACATATGGCCTCTGCCAAGCAAGCTGGCCAATGCCATTGGTCGAACATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGTATTTCAAGATCTAGAAGTTTCTGCACCTGTACGGACATTGAAGGGAAAATCCTCTTTTTTGGGGCAGGAAGAACCTAAACGTGATGCCGCATTAAAGGGTAGTAGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGTGCTAGCCACCCACCAGAGCCCGTGGATATGGATCTTATGAGAACAGTTTATGTACCCATAGGGCAAAATAAACCTGATGCTGGTTGCTTGATGAAGAGTTTTTCAGTGAAGGGCCCTTTTCTTGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGTCCAGCTGTTCTCTCCCCTGCAGAAAGCTTGGTTGATGAACCGCATGACTTGGGTGTTTTGTCTTCCCCCTTTTCAATTCCTCGTGCATCGCAAAATACAGAGACCTCTCTCCTTCCACCAGATTCTGAGGAGAAGGAGTGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTGTTGAAAGAAACTGTGAAAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGACAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATTACAGGAAGCGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGCTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACGGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCATTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGACAACCAGGGAAACATTTCTCTGAATATGCTGCAAGGTTTTATGCAGCAGAGGTTTTACTGGCACTCGAATATCTTCACATGCTTGGAGTTGTCTATAGGGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTCTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCCTGTATTGAGCCGTCATCAGTTTGCATCCAACCTGCATGCTTTATTCCTCGACTCTTCCCTCAGAAAAGCAAAAAGAAAAGTCCCAAGCCCCGAAGTGATCTGGGGTTGCAATCCAGTACACTTCCCGAGCTGGTAGCAGAGCCTACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCACGAATACCTAGCCCCTGAAATTATTAAAGGAGAGGGTCATGGAAGTGCTGTCGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAAACCCCATTTAAGGGATCGGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAATCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTACTAGTAAAGGAGCCACAGCATCGACTCGGGGTGAAGAGAGGTGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCAGCAGCAGTAAGAGGATGGTGGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA | 2190 | 45.57 | MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGQCHWSNMHSAKVREVGRSIGQVFQDLEVSAPVRTLKGKSSFLGQEEPKRDAALKGSSNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSVERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSPKPRSDLGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGSSSKRMVGTDVVKSGGQYLDFEFF | 729 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 44806097 | 44810721 | + | Maker00032156 | Lcy11g2128 | 648029 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy11g2128 | 729 | PANTHER | FLIPPASE KINASE 1-RELATED | 216 | 690 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Lcy11g2128 | 729 | MobiDBLite | consensus disorder prediction | 266 | 310 | - | - | |
Lcy11g2128 | 729 | FunFam | serine/threonine-protein kinase D6PK-like | 564 | 687 | - | - | |
Lcy11g2128 | 729 | FunFam | serine/threonine-protein kinase D6PK-like | 421 | 488 | - | - | |
Lcy11g2128 | 729 | ProSiteProfiles | Protein kinase domain profile. | 337 | 669 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g2128 | 729 | CDD | STKc_phototropin_like | 335 | 688 | - | - | |
Lcy11g2128 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 319 | 693 | IPR011009 | - | |
Lcy11g2128 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 335 | 420 | - | - | |
Lcy11g2128 | 729 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy11g2128 | 729 | MobiDBLite | consensus disorder prediction | 266 | 314 | - | - | |
Lcy11g2128 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 564 | 686 | - | - | |
Lcy11g2128 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 421 | 492 | - | - | |
Lcy11g2128 | 729 | MobiDBLite | consensus disorder prediction | 193 | 216 | - | - | |
Lcy11g2128 | 729 | FunFam | Serine/threonine-protein kinase D6PK-like | 335 | 420 | - | - | |
Lcy11g2128 | 729 | SMART | serkin_6 | 337 | 669 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g2128 | 729 | Pfam | Protein kinase domain | 566 | 669 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g2128 | 729 | Pfam | Protein kinase domain | 338 | 488 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy11g2128 | 729 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g2128 | Lcy-Chr11:44806097 | Lcy1g0511 | Lcy-Chr1:4446560 | 1.02E-208 | dispersed | |
Lcy11g2128 | Lcy-Chr11:44806097 | Lcy5g1341 | Lcy-Chr5:31986784 | 1.90E-228 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65483 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy11g2128 | - | - | - | 0.0 |