Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g0095 ATGCTCCACCCTTTGCGAGTTAGGGCTTATTCCCAGGCTCGCAAGTGGGTGCTAGACATTCTTGTTACTCGCCTTGTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGGGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGAATCTTCAGCGTTTTGTTATACTCAATTTCTGGCCTAAGTTGATGAAGATTTTGCTTCGAAAGCGTTGGAAGGCTTACTTACAACTCAAAAGCAAGCAAGAAAAGGTCAACTCTTATGTCCTAGTCTCATTCATAAAGGCAGGAGAGAAGGTCAAACAAGAAGAAAGAGAAGAATGTGTTGTATCATATGTGGATACATTGCTTGATTTGCAGCTAACCCACCACAATAGAAAGCTTAAAAATGAAGAAATAGTGAATTTATGCTCAGAGTTCCTCAACGCCGGGACCGACACCACTGCCACAACCTTGCAATGGATAATGGCAAACTTGGTGAAATACCCAAAAATCCAACATAAACTTTTTGAAGAGATCAAAGGAGTCATGATAACAACACAACACAGGTAA 627 40.99 MLHPLRVRAYSQARKWVLDILVTRLVSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVNLQRFVILNFWPKLMKILLRKRWKAYLQLKSKQEKVNSYVLVSFIKAGEKVKQEEREECVVSYVDTLLDLQLTHHNRKLKNEEIVNLCSEFLNAGTDTTATTLQWIMANLVKYPKIQHKLFEEIKGVMITTQHR 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1238271 1239871 - Maker00038645 Lcy12g0095 648158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g0095 208 PRINTS E-class P450 group I signature 43 61 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0095 208 PRINTS E-class P450 group I signature 177 203 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0095 208 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0095 208 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 200 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lcy12g0095 208 SUPERFAMILY Cytochrome P450 2 202 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0095 208 Gene3D Cytochrome P450 1 207 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0095 208 Pfam Cytochrome P450 9 202 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0095 Lcy-Chr12:1238271 Lcy12g0097 Lcy-Chr12:1258630 5.84E-114 dispersed
Lcy12g0095 Lcy-Chr12:1238271 Lcy12g0096 Lcy-Chr12:1253301 3.98E-105 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g0095 K24184 - csv:101218555 306.219