Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy12g0097 | ATGAATTGGATTCTTCTCTTAATTGTCTCTTTCTTCCTTTCTTTTCTTGTGAAGTTATTTCTTTTCCCCTCTCGGCGTGGCCTTTACAAGCTCCCTCCGGGGCCAGCCACATTCCCAATTCTCTCAAACTTCCTATGGCTCCGCGAGTCGCCCCTTGAGTTCGAATCTACGCTGCGCAGTTTCATTGCCAAATATGGCCCCATCATCACCCTCCACATCGGCCCGTCGCCGACCATCGTCATCTCTGACCGCTCCATCGCCCACAAGGCCCTCGTCCAAAACGGCGCCATCTTCGCCGACCGCCCCCAGGTCCTTGCCATCAACAGGATTGCCACCTCCGCCAGCTGCCTCGACAACATCACCTCCGCCCCTTATGGCTCCACTTGGCGCCTCCTCCGCCGCAATCTCGCAGCGGAGATGCTCCACCCTTCGCGGGTCCGAGCTTATTCTCGGGCCCGCAGGTGGGTTTTAGACATTCTTGTTACTCGCCTTCTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGAGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGAATCTTCAACGTTTTGTTATACTCAATTTCTGGCCCAAGTTGATGAAGATTTTGCTTCGAAAGCGCTGGAAGGCTTATTTACAACTCAAAAGCAAGCAAGAAAAGGGTGATCCCTACATACCAGTTCTAATTCCATTTATCAAGGCACGAGAGAAGGCCAAACAAGAAACAGCAAAAAAAGATGGAGAAGAAAAAGAAGAATTTGTAGTATCATATGTGGATACTCTGCTCGATTTGCACCTCATCGATGAAAATAGAAAGCTTAAAAATGAAGAAATGGTGAGTTTATGCTCGGAGTTCCTCGACGCCGGGACTGACACCACTGCCACAACTTTGCAATGGATAATGGCAAACTTAGTAAAGTACCCACACATCCAACAAAAACTATTCGAAGAGATCAAACGAGTCATGGGATCCAACACAAAACAACACGGGTTACGAGAGGAGGAGGTGAAGGAAGAAGATTTGGGGAAGCTTCCATATCTGAAAGCCGTGGTTCTAGAAGGATTACGAAGGCACCCGCCGGGGCATTTCATGGTACCACATGCAGTGAAAGAAGATACGATGTTGGAGAATTATTTCGTACCGAAAAATGGGACGGTGAATATCTTGGCAGTGGAGATGGGGTGGGATCCGGAAGTATGGGAGGATCCGATGGTGTTTAAGCCAGAGAGGTTCGTGAGCGGCGACGGAGAAGCGACGTTGTCGACGACGACGTTTGATGTTACATGTAGCAAGGAGATTAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCAGGGGCTGGTTTAGCAATGCTTCATTTGGAATATTTTGTTGCAAATTTGGTTTGGCGATTTGAGTGGAAGGCTGTGGAAGGAGATGAGATTGATTTATCAGAGAAGATGGAATTCACCATTGTGATGAAGAACCCTCTCAAAGCCCATATACATCCAAGGTTTTAG | 1587 | 47.57 | MNWILLLIVSFFLSFLVKLFLFPSRRGLYKLPPGPATFPILSNFLWLRESPLEFESTLRSFIAKYGPIITLHIGPSPTIVISDRSIAHKALVQNGAIFADRPQVLAINRIATSASCLDNITSAPYGSTWRLLRRNLAAEMLHPSRVRAYSRARRWVLDILVTRLLSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVNLQRFVILNFWPKLMKILLRKRWKAYLQLKSKQEKGDPYIPVLIPFIKAREKAKQETAKKDGEEKEEFVVSYVDTLLDLHLIDENRKLKNEEMVSLCSEFLDAGTDTTATTLQWIMANLVKYPHIQQKLFEEIKRVMGSNTKQHGLREEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFMVPHAVKEDTMLENYFVPKNGTVNILAVEMGWDPEVWEDPMVFKPERFVSGDGEATLSTTTFDVTCSKEIKMMPFGAGRRICPGAGLAMLHLEYFVANLVWRFEWKAVEGDEIDLSEKMEFTIVMKNPLKAHIHPRF | 528 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1258630 | 1261286 | - | Maker00038478 | Lcy12g0097 | 648160 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy12g0097 | 528 | SUPERFAMILY | Cytochrome P450 | 32 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | Pfam | Cytochrome P450 | 32 | 519 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | FunFam | Cytochrome P450 family protein | 25 | 528 | - | - | |
| Lcy12g0097 | 528 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 12 | 526 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 417 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 376 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy12g0097 | 528 | Gene3D | Cytochrome P450 | 25 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy12g0097 | 528 | CDD | CYP77_89 | 64 | 521 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy12g0094 | Lcy-Chr12:1235391 | Lcy12g0097 | Lcy-Chr12:1258630 | 5.36E-88 | dispersed | |
| Lcy12g0095 | Lcy-Chr12:1238271 | Lcy12g0097 | Lcy-Chr12:1258630 | 5.84E-114 | dispersed | |
| Lcy12g0097 | Lcy-Chr12:1258630 | Lcy8g0973 | Lcy-Chr8:34339365 | 2.66E-238 | dispersed | |
| Lcy12g0096 | Lcy-Chr12:1253301 | Lcy12g0097 | Lcy-Chr12:1258630 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy12g0097 | K24184 | - | csv:101218555 | 805.438 |