Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g0097 ATGAATTGGATTCTTCTCTTAATTGTCTCTTTCTTCCTTTCTTTTCTTGTGAAGTTATTTCTTTTCCCCTCTCGGCGTGGCCTTTACAAGCTCCCTCCGGGGCCAGCCACATTCCCAATTCTCTCAAACTTCCTATGGCTCCGCGAGTCGCCCCTTGAGTTCGAATCTACGCTGCGCAGTTTCATTGCCAAATATGGCCCCATCATCACCCTCCACATCGGCCCGTCGCCGACCATCGTCATCTCTGACCGCTCCATCGCCCACAAGGCCCTCGTCCAAAACGGCGCCATCTTCGCCGACCGCCCCCAGGTCCTTGCCATCAACAGGATTGCCACCTCCGCCAGCTGCCTCGACAACATCACCTCCGCCCCTTATGGCTCCACTTGGCGCCTCCTCCGCCGCAATCTCGCAGCGGAGATGCTCCACCCTTCGCGGGTCCGAGCTTATTCTCGGGCCCGCAGGTGGGTTTTAGACATTCTTGTTACTCGCCTTCTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGAGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGAATCTTCAACGTTTTGTTATACTCAATTTCTGGCCCAAGTTGATGAAGATTTTGCTTCGAAAGCGCTGGAAGGCTTATTTACAACTCAAAAGCAAGCAAGAAAAGGGTGATCCCTACATACCAGTTCTAATTCCATTTATCAAGGCACGAGAGAAGGCCAAACAAGAAACAGCAAAAAAAGATGGAGAAGAAAAAGAAGAATTTGTAGTATCATATGTGGATACTCTGCTCGATTTGCACCTCATCGATGAAAATAGAAAGCTTAAAAATGAAGAAATGGTGAGTTTATGCTCGGAGTTCCTCGACGCCGGGACTGACACCACTGCCACAACTTTGCAATGGATAATGGCAAACTTAGTAAAGTACCCACACATCCAACAAAAACTATTCGAAGAGATCAAACGAGTCATGGGATCCAACACAAAACAACACGGGTTACGAGAGGAGGAGGTGAAGGAAGAAGATTTGGGGAAGCTTCCATATCTGAAAGCCGTGGTTCTAGAAGGATTACGAAGGCACCCGCCGGGGCATTTCATGGTACCACATGCAGTGAAAGAAGATACGATGTTGGAGAATTATTTCGTACCGAAAAATGGGACGGTGAATATCTTGGCAGTGGAGATGGGGTGGGATCCGGAAGTATGGGAGGATCCGATGGTGTTTAAGCCAGAGAGGTTCGTGAGCGGCGACGGAGAAGCGACGTTGTCGACGACGACGTTTGATGTTACATGTAGCAAGGAGATTAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCAGGGGCTGGTTTAGCAATGCTTCATTTGGAATATTTTGTTGCAAATTTGGTTTGGCGATTTGAGTGGAAGGCTGTGGAAGGAGATGAGATTGATTTATCAGAGAAGATGGAATTCACCATTGTGATGAAGAACCCTCTCAAAGCCCATATACATCCAAGGTTTTAG 1587 47.57 MNWILLLIVSFFLSFLVKLFLFPSRRGLYKLPPGPATFPILSNFLWLRESPLEFESTLRSFIAKYGPIITLHIGPSPTIVISDRSIAHKALVQNGAIFADRPQVLAINRIATSASCLDNITSAPYGSTWRLLRRNLAAEMLHPSRVRAYSRARRWVLDILVTRLLSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVNLQRFVILNFWPKLMKILLRKRWKAYLQLKSKQEKGDPYIPVLIPFIKAREKAKQETAKKDGEEKEEFVVSYVDTLLDLHLIDENRKLKNEEMVSLCSEFLDAGTDTTATTLQWIMANLVKYPHIQQKLFEEIKRVMGSNTKQHGLREEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFMVPHAVKEDTMLENYFVPKNGTVNILAVEMGWDPEVWEDPMVFKPERFVSGDGEATLSTTTFDVTCSKEIKMMPFGAGRRICPGAGLAMLHLEYFVANLVWRFEWKAVEGDEIDLSEKMEFTIVMKNPLKAHIHPRF 528
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 1258630 1261286 - Maker00038478 Lcy12g0097 648160
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g0097 528 SUPERFAMILY Cytochrome P450 32 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 Pfam Cytochrome P450 32 519 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 FunFam Cytochrome P450 family protein 25 528 - -
Lcy12g0097 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 526 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lcy12g0097 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy12g0097 528 Gene3D Cytochrome P450 25 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g0097 528 CDD CYP77_89 64 521 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0094 Lcy-Chr12:1235391 Lcy12g0097 Lcy-Chr12:1258630 5.36E-88 dispersed
Lcy12g0095 Lcy-Chr12:1238271 Lcy12g0097 Lcy-Chr12:1258630 5.84E-114 dispersed
Lcy12g0097 Lcy-Chr12:1258630 Lcy8g0973 Lcy-Chr8:34339365 2.66E-238 dispersed
Lcy12g0096 Lcy-Chr12:1253301 Lcy12g0097 Lcy-Chr12:1258630 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g0097 K24184 - csv:101218555 805.438