Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy12g0211 | ATGGAGAATTTGATGGGTCTTCTGAGAATCCATGTTTCTAGAGGTGTCAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTATTGTCAAGATGGGCAAACAGAAGTTGAAGACTCGAGTGGTGAAACAAAATATAAACCCGGAGTGGAACGAAGATCTAACTCTATCGATCCAAGATCCGAATCTTCCGGTCTACCTGATCGTATACGACAAGGACTTGTTCTCACTAGACGACAGGATGGGGGACGCAGAGTTTGACGTTCGTCCATTCATGGAAGCTGTGAAGATGAGGCTGAACAATCTCCCAAGTGGAACAGTCATTAGAAAGATTCAACCAAACAGGGAAAATTGCCTGTCTGAAGAAAGTTGCATTGTTTGGGCAAATGGACAAGTTGTTCAGAAAATGTTTCTTAGGCTAAGAAATGTTGAGTCTGGTGAAGTTGAGCTCGAGTTGAAATGGATCGATATTCCTGGTTCAAGGGGATTGTAG | 498 | 42.57 | MENLMGLLRIHVSRGVNLAVRDVVSSDPYVIVKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVYLIVYDKDLFSLDDRMGDAEFDVRPFMEAVKMRLNNLPSGTVIRKIQPNRENCLSEESCIVWANGQVVQKMFLRLRNVESGEVELELKWIDIPGSRGL | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2651305 | 2652956 | + | Maker00038499 | Lcy12g0211 | 648274 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy12g0211 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
Lcy12g0211 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
Lcy12g0211 | 165 | Pfam | C2 domain | 6 | 93 | IPR000008 | - | |
Lcy12g0211 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 102 | IPR035892 | - | |
Lcy12g0211 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Lcy12g0211 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
Lcy12g0211 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g0211 | Lcy-Chr12:2651305 | Lcy2g0383 | Lcy-Chr2:3172026 | 2.51E-82 | dispersed | |
Lcy10g1388 | Lcy-Chr10:37243195 | Lcy12g0211 | Lcy-Chr12:2651305 | 1.05E-67 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy12g0211 | - | - | - | 0.0 |