Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g0299 ATGGTTCAAAGATTTGGAACAGACAGAGTTGGCTACACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTCATCGGTGGGATCGGTGTTTACAACTTCATAAAATACGACCCATCTGTGATTAAGGCCTTAAATCCAATGTACATTGTTCATTACTTCCAAAGGAACAAGAAGGATGCTTGGATCTCTCTTGGTGGCATTGTTCTTTCCATTACAGCGTTGTTCGCCGACGTCGGGCATTTCAGCGTGCGATCGATCCAACTAAGCATGTCGGCAGTGACCTACCCAGCTCTAATCTGTGCATATGTAGGCCAAGCCTCCTTTCTTCGCAAGCATAACGATCTAGTTTCAGACACATTCTACAAGTCAATTCCTGGAAGTCTGTATTGGCCAATGTTTGTGTTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACTTTCTCTATAATTCAACAGTCAATTTCACTTGGATGCTTCCCTACAGTTAAAGTGGTTCACACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTGGTGTCACTTTGGGCTTCAAGAACACTACAAAGATTGGCAATGCATATGCAATGGCTAATCGGATCTCAGGTGTTTCACAAGTGTCCCCGGCTGACGTTCCCGACATGTCGTCCGATGTCGACGTAGAAGAAGAAGAAGAAGTTGCGCCTTCGTCTCTTTCTTCTCAAAAGCTCCGACGATACGACTCCTTGGATTTAGAGTCTCGAAAACTCGACGGTCATCATCCTCATCACTCCGACGCCAAGGTCTTCTCTATTAACTCTACATCTTTCTTTTCATTCTCCATTTCGTTAGCTCTTGATTGTGTATACATTTATGTCCAATGGCAGAACAAGAAATGGAGCGTGATATTACAACTGGCATTCCAGAGCATGGGCATAGTCTACGGCGACATCGGAACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGAATAAAGCACAACGACGACGTTTTAGGAGCGCTGTCTTTGATCTTCTACACCATAACTCTGCTTCCGGTCATCAAGTACGTGTTCATCGTTCTCAGAGCAACCGACAACGGAGAAGGCGGAACGTTTGCGCTGTACTCTTTGATCTGTCGATACGCGAAATTAGGGCTAATTCCGAACGAACAGATTGAAGATCGAGATGTGTCGAATTACCAGTTGAGTTTGCCGAATGAGAGAGAGAAGAGAGCTTCGAAGATCCAGTCGAGGCTGGAGGAGAGCCATTTCGCGAAGGTGTTTCTTCTGTTTGCGACGATGCTTGGAACCTCCATGGTTATCGGCGATGGCGTTCTCACTCCTTGTATCTCAGTTTTATCTGCTGTGGGAGGGATCAAGGAAGCTAACCCTGCAATGACAGAAGGTACGATTGTTTGGGCATCAGTAGGGATATTGGTGTTTCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTCATCGGTGGGATCGGTGTTTACAACTTCATAAAATACGACCCATCGGTGATTAAGGCCTTAAATCCAATGTACATTGTTCATTACTTCCAAAGGAACAAAAAGGATGCTTGGATCTCTCTTGGTGGCACTGTTCTTTCCATTACAGGAGCCGAAGCGTTGTTTGCCGACGTCGGGCATTTCAGTGTGCGATCCATCCAACTAAGCATGTCAACAGTTGCCTACCCAACTCTAATCTGTGCATATGCAGGCCAAACCTCCTTTCTTCGCAAGCATAATGATCTAGTTTCAGACACATTCTACAAGTCAATTCCTGGAAGTCTGTATTGGCCAATGTTTGTGTTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACTTTCTCTATAATTCAACAGTCAATTTCACTTGGATGCTTCCCTACAGTTAAAGTGGTTCACACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTATTGGTGTCACTTTGGGCTTCAAGAACACTACAAAGATTGGCAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTTCTGATAATGGTGATGATATGGAAAACTCATATCCTTTTCATAATCACTTACATCCTCATCATTGGTAGTGTTGAATTGATTTATCTAAGTTCAGTCCTTTACAAGTTCGACCAAGGAGGCTATCTCCCTTTGGCTTTTGCAGCTGTTTTGATGACTGTAATGTATGTGTGGAATAGTGTCTTTAGGAAAAAGTACTTTTATGAGCTCAACCACAGAATCTCCTCAGAAAAGCTCAATGAGGTCGTCAATACCACCAGCTTTAGAAGAATTCCTGGCGTGGCATTGTTCTACTCTGACCTTGTTCAAGGCATCCCACCCATCTTCAGGCATTACGTCGAGCACGTGCCTGCGTTGCACTCTGTGCTCGTCTTCGTCACCATTAAATCGCTTCCTGTGAGCAAGGTTTTGGCCGAAGAACGTTTCCTCTTTCGTCAAGTAGAAGCCAAGAAGATTGACGTGTTTCGTTGCGTCGTTAGATACGGGTACGCAGACGTCCACACCGGACAAGAATCATTCGAGAGGATATTACTTGAGAGATTGGAGGAGTTCGAAAGAGAACAACAGAATAAATTGTCCAACAGCGAAAACGGAGACGACAAGAGAGTTGAAGGTGAAGATGAGAAAGGATTTGGAGGAGTTGCAAATGCATGGAAGGATGGAGTTGTTCACTTGATTGGGGAAACTGAGGTGGTTGCTCAAAAGGGAGCTAGCTTTGGAAAGAGGATTATGATAGACTATGCATATAGCTTCTTGAAGAGGAATTTGGGGAAAACTGATCAAGTGTTTGATATTCCTCACAAGCATATGCTCAAAGTAGGAATGATTTATGAACTTTAG 3006 43.78 MVQRFGTDRVGYTFAPIIFIWFGFIGGIGVYNFIKYDPSVIKALNPMYIVHYFQRNKKDAWISLGGIVLSITALFADVGHFSVRSIQLSMSAVTYPALICAYVGQASFLRKHNDLVSDTFYKSIPGSLYWPMFVLAVSASIIASQAMISGTFSIIQQSISLGCFPTVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYAMANRISGVSQVSPADVPDMSSDVDVEEEEEVAPSSLSSQKLRRYDSLDLESRKLDGHHPHHSDAKVFSINSTSFFSFSISLALDCVYIYVQWQNKKWSVILQLAFQSMGIVYGDIGTSPLYVYSSTFPDGIKHNDDVLGALSLIFYTITLLPVIKYVFIVLRATDNGEGGTFALYSLICRYAKLGLIPNEQIEDRDVSNYQLSLPNEREKRASKIQSRLEESHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEANPAMTEGTIVWASVGILVFLFMVQRFGTDKVGYTFAPIIFIWFGFIGGIGVYNFIKYDPSVIKALNPMYIVHYFQRNKKDAWISLGGTVLSITGAEALFADVGHFSVRSIQLSMSTVAYPTLICAYAGQTSFLRKHNDLVSDTFYKSIPGSLYWPMFVLAVSASIIASQAMISGTFSIIQQSISLGCFPTVKVVHTSAKYEGQVYVPEINYLLMLACIGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILFIITYILIIGSVELIYLSSVLYKFDQGGYLPLAFAAVLMTVMYVWNSVFRKKYFYELNHRISSEKLNEVVNTTSFRRIPGVALFYSDLVQGIPPIFRHYVEHVPALHSVLVFVTIKSLPVSKVLAEERFLFRQVEAKKIDVFRCVVRYGYADVHTGQESFERILLERLEEFEREQQNKLSNSENGDDKRVEGEDEKGFGGVANAWKDGVVHLIGETEVVAQKGASFGKRIMIDYAYSFLKRNLGKTDQVFDIPHKHMLKVGMIYEL 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3662944 3671441 - Maker00038562 Lcy12g0299 648362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g0299 1001 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 213 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy12g0299 1001 NCBIfam potassium uptake protein 314 1000 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy12g0299 1001 Pfam K+ potassium transporter C-terminal domain 814 1001 IPR053952 -
Lcy12g0299 1001 MobiDBLite consensus disorder prediction 223 250 - -
Lcy12g0299 1001 Pfam K+ potassium transporter integral membrane domain 314 801 IPR053951 -
Lcy12g0299 1001 Pfam K+ potassium transporter integral membrane domain 1 214 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0299 Lcy-Chr12:3662944 Lcy12g0301 Lcy-Chr12:3707833 0 dispersed
Lcy12g0299 Lcy-Chr12:3662944 Lcy12g0300 Lcy-Chr12:3671950 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g0299 K03549 - csv:101215797 1178.7