Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g0324 ATGGCATTGCTTGCTAAAGAAAGTGTAGAAAGTGGACAACAAATTTCTAGTATTATTGGGACTGGCAAATGTGAAAGTTACTTAATTTTTAGTGGTGAAACTTCCCTTGGGGGTGCATTTCGGATATTCCTATATTTTATGGGCCTTGCTTATTGTTTCATTGGATTGTCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCAGACACCAATGCTGAAATTATTCGATATGAGAAGGTCTGGAATTTTACGGTTGCAGATATCAGCTTACTGGCATTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTCTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTCCCCATTCATGCTGTTTGCGTTGTAGTGCCTAAGGCAGGAGAGTTGAAAAAAATATCTGACTTAGGAGTTTGGCTAGTTGAACTCGTTTGGTCTTTCTGGGCTTATGTTTGGCTGTACATTATTTTGGAGGTGTGGACTCCAAATGTTATCACTCTTTGGGAAGCTTTGTTGACTGTGCTGCAATATGGATTATTGCTGACACATGCTTATGCTCAAGATAAGCGATGGCCCTACGTGTCCCTTCCTTTTGCAAGAACTGAGAGGCCAGAAGAATGGGTGCCACCCGAGACTGCTACATGCAGACAGGATGATGTCTATGGAGAGATATTTGAAGCCCGTGAGAATGGGGAGCGAAGCATTGTTGACATTTTCTCTGTCCATGATAAAAATGAGAAAGTTCCTGGACACGATGTTGCTGAATCCTCGTGTAGTAATTTTCCGGAGGAGATGGATAAAAACGTAGACCATCCTCGTGTGCTTACAGTTTGGAAACAACAATTTGTGGATGCACTATCGTTGGAAACTTTGGAATCAAGAAAGCTGAGTAACATCTATGTACGACTAGCGAGATTATGCTGGCAACTGTTTCTTGCTCCGTGGAGACTTTTGTTTGCTTTTGTGCCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTGGCTCCCTTATTTTCATCAGTGGGATAGCTTATATCGTCACTAAGCTCACAGATCTTATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCTGGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCCGCTGAGCGGCAGACAACCGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCAGTGCATACAATTTCATAGCGTATAGAGAGCCGTTGAGGATAGAGGATGCAGCAGGGCTGAGCTTCTCTTTGCTGGTGTTTTTTTCGACCTCTGTGGGATGCATTGCTGTTCTTGTGGTTAGGCGTCTAATATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGATTACGTGCATCTATTTCATGCTTCTTTGGGTCATCTTTGTTGTTCTCTCTTCCCTCAAGGTTTCAGATATCATCTGA 1602 43.2 MALLAKESVESGQQISSIIGTGKCESYLIFSGETSLGGAFRIFLYFMGLAYCFIGLSAITARFFRSMENVVKHSRKVVEIDPDTNAEIIRYEKVWNFTVADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDLGVWLVELVWSFWAYVWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKRWPYVSLPFARTERPEEWVPPETATCRQDDVYGEIFEARENGERSIVDIFSVHDKNEKVPGHDVAESSCSNFPEEMDKNVDHPRVLTVWKQQFVDALSLETLESRKLSNIYVRLARLCWQLFLAPWRLLFAFVPPYHIAHGWLAFIGSLIFISGIAYIVTKLTDLISCVSGINPYVIAFTALAGGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISSAYNFIAYREPLRIEDAAGLSFSLLVFFSTSVGCIAVLVVRRLILGAELGGPRLWAWITCIYFMLLWVIFVVLSSLKVSDII 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3975716 3983643 + Maker00038706 Lcy12g0324 648387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g0324 533 Pfam Sodium/calcium exchanger protein 45 216 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy12g0324 533 Pfam Sodium/calcium exchanger protein 361 525 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy12g0324 533 Gene3D - 98 237 IPR044880 -
Lcy12g0324 533 Gene3D - 325 527 IPR044880 -
Lcy12g0324 533 PANTHER SODIUM/CALCIUM EXCHANGER 11 223 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g0324 K03452 - csv:101205540 914.835