Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy12g0794 | ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTTTCACGATTGCATTATGATTTACTCTGTGATTGCTGTGTTTTGTTTACTTGATTTCGAATCGGTTTGCTGCAATGTGAAAGAACCTGAGAGCAAGTGCTTACGACGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACAGACGGTTGATGAAGATGAAGAGGAGGACACTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCTGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGACTTTAAAAGGGAACACGCAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCTGCTTAGAGCTTCTGCTCATATAAGAGCTTCATAA | 696 | 41.24 | MEEICYLFQSKCFHDCIMIYSVIAVFCLLDFESVCCNVKEPESKCLRRIYSESGWSYSYTMTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVLKQAEEAEKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS | 231 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 10340189 | 10341253 | - | Maker00025122 | Lcy12g0794 | 648857 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy12g0794 | 231 | MobiDBLite | consensus disorder prediction | 85 | 138 | - | - | |
| Lcy12g0794 | 231 | PANTHER | ZINC FINGER PROTEIN 183 | 72 | 231 | IPR039971 | GO:0005684(PANTHER)|GO:0034247(PANTHER) | |
| Lcy12g0794 | 231 | MobiDBLite | consensus disorder prediction | 105 | 138 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g1489 | Lcy-Chr10:39099372 | Lcy12g0794 | Lcy-Chr12:10340189 | 5.75E-102 | dispersed | |
| Lcy12g0794 | Lcy-Chr12:10340189 | Lcy10g0992 | Lcy-Chr10:31874936 | 6.31E-110 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy12g0794 | K13127 | - | csv:101221334 | 288.115 |