Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g1493 ATGCTGGGGAATTTGTTGCAGTTGAAGGAGAAGAAGCCTCACAAGACGTTTTCTCAGTGGGCCGAGACGTACGGTCCGGTTTATTCTATAAGAACCGGCGCTTCCACTGTGGTTGTTCTCAACACCGCCGAGGTCGCCAAAGAGGCTATGGTGACGAGATATTCCTCCATTTCCAGTAGAAAGCTAAGCAAAGCCCTCACCATTTTGACTTCTGATAAATGCATGGTTGCTATGAGTGATTACAATGACTTTCACAAGTTGGTGAAGGATTCTCCTTCAGAATCTGTTAATTTTCGAAAGATCTTCGAAGCTGAACTCTTTCGGCTGGCGCTTAAAGAAACATTTGGGAAGGATGCTGAGTCGTTATATGTCGATGGACTTGGTACGACGTTGCCTAGAGAAGATCTGTTCAAGGTTTTAGTGATTGATCCGATGGAGGGTGCGAAAGGGAAGAAGAAGGTGAACCGAGGGGAGAAGGGAAGATAA 486 45.88 MLGNLLQLKEKKPHKTFSQWAETYGPVYSIRTGASTVVVLNTAEVAKEAMVTRYSSISSRKLSKALTILTSDKCMVAMSDYNDFHKLVKDSPSESVNFRKIFEAELFRLALKETFGKDAESLYVDGLGTTLPREDLFKVLVIDPMEGAKGKKKVNRGEKGR 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34287287 34288532 + Maker00029341 Lcy12g1493 649556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g1493 161 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 84 148 IPR044225 GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(InterPro)|GO:0010241(PANTHER)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro)
Lcy12g1493 161 SUPERFAMILY Cytochrome P450 2 116 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1493 161 Pfam Cytochrome P450 2 86 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1493 161 PRINTS E-class P450 group I signature 21 40 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1493 161 PRINTS E-class P450 group I signature 45 66 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1493 161 Gene3D Cytochrome P450 1 129 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1493 Lcy-Chr12:34287287 Lcy9g1074 Lcy-Chr9:34616473 1.00E-39 dispersed
Lcy12g1493 Lcy-Chr12:34287287 Lcy9g2146 Lcy-Chr9:46082777 6.79E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g1493 K04122 - csv:101209283 243.432