Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g1569 ATGGCGCCCCATCTTCCTCCCAGTATTCATTCTTCTTCATTTTCCCTCTTTCTCTTTCTCCTTACCATGCCATTGCTCCGACCCACCGCCGCCATGACCTTGCCGGAGGTCTTCTCCCCCCGGTTGCCCGATAGGGGTCCGGTTATTCCGGTCAGCAGTCTCGTCAAGTTCCTCGAGCGTCTTCAGGTTGTGGCGCTCGACTCCTTCGGTAAAGTGGATTTCGATCTTAAATACTATGTCGATTTGTCGCTGAAATTCGATTTGAATTCTACCGCGAGGGCGTTCGATGCCCTTGGGCGATCCTCCAATGGCTCTGTACCGGCGGAGGATTTGAAGGCGTTTATTAGAGAGTATTTCAATAGTGCTGGCACCGATTTGGTGTATTCCGACCCGGTGGATTTTCTCCCTCAGCCTGTGGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGATATTCATAATTTCTGGAAGAATCTTAGCCGGAGAGCCTCCGATGATCTCCTTCATCGGCCGGATACTCACACTCTGCTGCCGTTGCCGGAGCCCTGCGTCATTCCGGGTTCCAGATTCCGGGAAGTTTACTATTGGGATTCATATTGGATTATCAGAGGTTTGTTAGCAAGTAAAATGTATGAAACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCTAGAGTTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATTTACCTTACGACACGGGATTTAGAGTTTGTGAGTAATGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCAATTACTGTCCAGAATGCTCCTGGTGGAAATCATTCTTTATCTAGGTACTATGCAATGTGGAACGAACCACGACCTGAATCTTCGCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTAAGTAACTATGAAAAGCAGCAACTATACCGAGAGATCGCATCGGCCGCAGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCAGACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATCTGGCAAGAGCTGTTGGAGATTATGGCACTGCAGAGTACTTTTTGGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTCGATAATGGCTCTTGCAAGGTTGCCCATACATGGGATGCTCGGAACCAGAATCAGAACATATATGCTTCAAACTTCATTCCTTTGTGGATCGAATCGTTCTACTCCGATAGCAGACAGATGAAGAAAGTCCTGAAAAGCTTACGGAACTCAGGCTTGCTGTGCAATGCTGGGATTGCAACTTCAACAATCAATTCAGGAGAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATTGTCGAGGGACTGGTGAGATCCGAACTGAAAGAAGCAAGAGCATTGGCTAAGGATATCGCCGCGAGATGGCTCCGAACCAACTATGTAGCTTACAAGAAAACAGGATATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGTGCAGGTGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCTTTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATAGATTGCTACTTAACTTCTTAA 1806 45.68 MAPHLPPSIHSSSFSLFLFLLTMPLLRPTAAMTLPEVFSPRLPDRGPVIPVSSLVKFLERLQVVALDSFGKVDFDLKYYVDLSLKFDLNSTARAFDALGRSSNGSVPAEDLKAFIREYFNSAGTDLVYSDPVDFLPQPVGFLPKVENAEVRAWALDIHNFWKNLSRRASDDLLHRPDTHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYETAKGIVINLISMIDEFGHVLNGARVYYTNRSQPPLLSSMVYDIYLTTRDLEFVSNALPALIKEHKFWNSGFHSITVQNAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVSNYEKQQLYREIASAAESGWDFSSRWMRDQTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYGTAEYFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSCKVAHTWDARNQNQNIYASNFIPLWIESFYSDSRQMKKVLKSLRNSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIVEGLVRSELKEARALAKDIAARWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTS 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35705831 35710038 - Maker00029384 Lcy12g1569 649632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g1569 601 PANTHER TREHALASE 61 597 IPR001661 GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Lcy12g1569 601 Pfam Trehalase 74 588 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 303 320 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 571 584 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 413 429 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 370 387 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 491 507 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 233 251 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 PRINTS Glycosyl hydrolase family 37 signature 338 355 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 ProSitePatterns Trehalase signature 2. 498 507 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
Lcy12g1569 601 Gene3D - 61 597 IPR012341 GO:0005975(InterPro)
Lcy12g1569 601 SUPERFAMILY Six-hairpin glycosidases 70 590 IPR008928 GO:0005975(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g1569 K01194 - csv:101208719 1053.51