Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy12g1569 | ATGGCGCCCCATCTTCCTCCCAGTATTCATTCTTCTTCATTTTCCCTCTTTCTCTTTCTCCTTACCATGCCATTGCTCCGACCCACCGCCGCCATGACCTTGCCGGAGGTCTTCTCCCCCCGGTTGCCCGATAGGGGTCCGGTTATTCCGGTCAGCAGTCTCGTCAAGTTCCTCGAGCGTCTTCAGGTTGTGGCGCTCGACTCCTTCGGTAAAGTGGATTTCGATCTTAAATACTATGTCGATTTGTCGCTGAAATTCGATTTGAATTCTACCGCGAGGGCGTTCGATGCCCTTGGGCGATCCTCCAATGGCTCTGTACCGGCGGAGGATTTGAAGGCGTTTATTAGAGAGTATTTCAATAGTGCTGGCACCGATTTGGTGTATTCCGACCCGGTGGATTTTCTCCCTCAGCCTGTGGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGATATTCATAATTTCTGGAAGAATCTTAGCCGGAGAGCCTCCGATGATCTCCTTCATCGGCCGGATACTCACACTCTGCTGCCGTTGCCGGAGCCCTGCGTCATTCCGGGTTCCAGATTCCGGGAAGTTTACTATTGGGATTCATATTGGATTATCAGAGGTTTGTTAGCAAGTAAAATGTATGAAACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCTAGAGTTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATTTACCTTACGACACGGGATTTAGAGTTTGTGAGTAATGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCAATTACTGTCCAGAATGCTCCTGGTGGAAATCATTCTTTATCTAGGTACTATGCAATGTGGAACGAACCACGACCTGAATCTTCGCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTAAGTAACTATGAAAAGCAGCAACTATACCGAGAGATCGCATCGGCCGCAGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCAGACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATCTGGCAAGAGCTGTTGGAGATTATGGCACTGCAGAGTACTTTTTGGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTCGATAATGGCTCTTGCAAGGTTGCCCATACATGGGATGCTCGGAACCAGAATCAGAACATATATGCTTCAAACTTCATTCCTTTGTGGATCGAATCGTTCTACTCCGATAGCAGACAGATGAAGAAAGTCCTGAAAAGCTTACGGAACTCAGGCTTGCTGTGCAATGCTGGGATTGCAACTTCAACAATCAATTCAGGAGAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATTGTCGAGGGACTGGTGAGATCCGAACTGAAAGAAGCAAGAGCATTGGCTAAGGATATCGCCGCGAGATGGCTCCGAACCAACTATGTAGCTTACAAGAAAACAGGATATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGTGCAGGTGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCTTTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATAGATTGCTACTTAACTTCTTAA | 1806 | 45.68 | MAPHLPPSIHSSSFSLFLFLLTMPLLRPTAAMTLPEVFSPRLPDRGPVIPVSSLVKFLERLQVVALDSFGKVDFDLKYYVDLSLKFDLNSTARAFDALGRSSNGSVPAEDLKAFIREYFNSAGTDLVYSDPVDFLPQPVGFLPKVENAEVRAWALDIHNFWKNLSRRASDDLLHRPDTHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYETAKGIVINLISMIDEFGHVLNGARVYYTNRSQPPLLSSMVYDIYLTTRDLEFVSNALPALIKEHKFWNSGFHSITVQNAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVSNYEKQQLYREIASAAESGWDFSSRWMRDQTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYGTAEYFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSCKVAHTWDARNQNQNIYASNFIPLWIESFYSDSRQMKKVLKSLRNSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIVEGLVRSELKEARALAKDIAARWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTS | 601 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 35705831 | 35710038 | - | Maker00029384 | Lcy12g1569 | 649632 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy12g1569 | 601 | PANTHER | TREHALASE | 61 | 597 | IPR001661 | GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER) | |
Lcy12g1569 | 601 | Pfam | Trehalase | 74 | 588 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 303 | 320 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 571 | 584 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 413 | 429 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 370 | 387 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 491 | 507 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 233 | 251 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | PRINTS | Glycosyl hydrolase family 37 signature | 338 | 355 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | ProSitePatterns | Trehalase signature 2. | 498 | 507 | IPR018232 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lcy12g1569 | 601 | Gene3D | - | 61 | 597 | IPR012341 | GO:0005975(InterPro) | |
Lcy12g1569 | 601 | SUPERFAMILY | Six-hairpin glycosidases | 70 | 590 | IPR008928 | GO:0005975(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy12g1569 | K01194 | - | csv:101208719 | 1053.51 |