Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy12g1773 | ATGGAACCCACCTCCAATTTCCTTCAAATTAGTCTCTTTGATTCTTTAAGTTTCTTGTTTCCTTGGCGGTGGATTGACAATGGCTATTACCAATCGCTTTTTCTTTCCACGTTCTTTGCTGGTTTTCTAGTTTTTCTTTACACTAAAACTCGGCGGCGCTGCTTGGCGGCGCCACCGCCGCCGGGTCCACGTGGGATTCCGCTACTCGGAAATCTTCCATTTATGAAACCAGAACTCCACACTTATTTTACCGAACTCGGTCAGAAATACGGCCCAATCGTAAAGCTCCAACTTGGTAGCAAGATTTGTATAGTCGTGAACTCGGCCTCTGTGGCACGTGAAGTTCTCAAGGACCACGACCTCACATTCGCCAACCGCGACGTTCCTTTCGTCGGCAAAGCCTCTTCCTACGGTGGCTGCGACATACTTTGGAGCCCCTATGGACCCGAATGGCGGATGTTGAGAAAAATAAGCATGGTAAAAATGCTTAGCAACGCCGCTTTGGACTCCGTTTGTGAACTTCGACGGAGAGAGGTTAGAAACACCGTGCGTTATTTTTATAGTCAAATTGGGTGTCCGATTGATGTAGGAGAGCAAAGTTTTGTGACGCTGCTTAATGTCTTTACTGCCATGCTTTGGGGTAGGACGGTGGACGGAGAAGAGAGGAAGAGCATTGGGGTGGAGCTGAGAGAGGCGGCGGCGGAGATGGTGGACTTATTGATGAAACCTAATGTCTCTGACTTCTTTCCGAGATTGGCGCGTTTCGATATCCAAGGAATCGAGAAGCGAATGCTTCAATTATTCCCAAGATTTGACAATATCTTTACCAAAATGATCGATAAAAGATTGGAAATTGCCAATAAGGGTGGCGGTGCAAGTGCACAAGAAAAGGATTTCTTGCAGTTCTTGCTTGAGAAGAAAGATGAAGGAGATTCCAAAACTCCTTTCACCTCCAACCATCTTAAAGCCTTGCTCATGGTAATCAATCAGAGTACTAGTTAA | 1002 | 46.21 | MEPTSNFLQISLFDSLSFLFPWRWIDNGYYQSLFLSTFFAGFLVFLYTKTRRRCLAAPPPPGPRGIPLLGNLPFMKPELHTYFTELGQKYGPIVKLQLGSKICIVVNSASVAREVLKDHDLTFANRDVPFVGKASSYGGCDILWSPYGPEWRMLRKISMVKMLSNAALDSVCELRRREVRNTVRYFYSQIGCPIDVGEQSFVTLLNVFTAMLWGRTVDGEERKSIGVELREAAAEMVDLLMKPNVSDFFPRLARFDIQGIEKRMLQLFPRFDNIFTKMIDKRLEIANKGGGASAQEKDFLQFLLEKKDEGDSKTPFTSNHLKALLMVINQSTS | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 38560430 | 38561431 | - | Maker00003077 | Lcy12g1773 | 649836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy12g1773 | 333 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | PRINTS | E-class P450 group I signature | 111 | 132 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | SUPERFAMILY | Cytochrome P450 | 60 | 327 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | Pfam | Cytochrome P450 | 60 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | Gene3D | Cytochrome P450 | 53 | 330 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy12g1773 | 333 | PANTHER | OS08G0547900 PROTEIN | 35 | 328 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g1769 | Lcy-Chr12:38510941 | Lcy12g1773 | Lcy-Chr12:38560430 | 4.23E-138 | dispersed | |
Lcy12g1773 | Lcy-Chr12:38560430 | Lcy12g1766 | Lcy-Chr12:38475058 | 2.93E-66 | dispersed | |
Lcy12g1770 | Lcy-Chr12:38524490 | Lcy12g1773 | Lcy-Chr12:38560430 | 7.07E-134 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy12g1773 | - | - | - | 0.0 |