Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g1773 ATGGAACCCACCTCCAATTTCCTTCAAATTAGTCTCTTTGATTCTTTAAGTTTCTTGTTTCCTTGGCGGTGGATTGACAATGGCTATTACCAATCGCTTTTTCTTTCCACGTTCTTTGCTGGTTTTCTAGTTTTTCTTTACACTAAAACTCGGCGGCGCTGCTTGGCGGCGCCACCGCCGCCGGGTCCACGTGGGATTCCGCTACTCGGAAATCTTCCATTTATGAAACCAGAACTCCACACTTATTTTACCGAACTCGGTCAGAAATACGGCCCAATCGTAAAGCTCCAACTTGGTAGCAAGATTTGTATAGTCGTGAACTCGGCCTCTGTGGCACGTGAAGTTCTCAAGGACCACGACCTCACATTCGCCAACCGCGACGTTCCTTTCGTCGGCAAAGCCTCTTCCTACGGTGGCTGCGACATACTTTGGAGCCCCTATGGACCCGAATGGCGGATGTTGAGAAAAATAAGCATGGTAAAAATGCTTAGCAACGCCGCTTTGGACTCCGTTTGTGAACTTCGACGGAGAGAGGTTAGAAACACCGTGCGTTATTTTTATAGTCAAATTGGGTGTCCGATTGATGTAGGAGAGCAAAGTTTTGTGACGCTGCTTAATGTCTTTACTGCCATGCTTTGGGGTAGGACGGTGGACGGAGAAGAGAGGAAGAGCATTGGGGTGGAGCTGAGAGAGGCGGCGGCGGAGATGGTGGACTTATTGATGAAACCTAATGTCTCTGACTTCTTTCCGAGATTGGCGCGTTTCGATATCCAAGGAATCGAGAAGCGAATGCTTCAATTATTCCCAAGATTTGACAATATCTTTACCAAAATGATCGATAAAAGATTGGAAATTGCCAATAAGGGTGGCGGTGCAAGTGCACAAGAAAAGGATTTCTTGCAGTTCTTGCTTGAGAAGAAAGATGAAGGAGATTCCAAAACTCCTTTCACCTCCAACCATCTTAAAGCCTTGCTCATGGTAATCAATCAGAGTACTAGTTAA 1002 46.21 MEPTSNFLQISLFDSLSFLFPWRWIDNGYYQSLFLSTFFAGFLVFLYTKTRRRCLAAPPPPGPRGIPLLGNLPFMKPELHTYFTELGQKYGPIVKLQLGSKICIVVNSASVAREVLKDHDLTFANRDVPFVGKASSYGGCDILWSPYGPEWRMLRKISMVKMLSNAALDSVCELRRREVRNTVRYFYSQIGCPIDVGEQSFVTLLNVFTAMLWGRTVDGEERKSIGVELREAAAEMVDLLMKPNVSDFFPRLARFDIQGIEKRMLQLFPRFDNIFTKMIDKRLEIANKGGGASAQEKDFLQFLLEKKDEGDSKTPFTSNHLKALLMVINQSTS 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 38560430 38561431 - Maker00003077 Lcy12g1773 649836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g1773 333 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 SUPERFAMILY Cytochrome P450 60 327 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 Pfam Cytochrome P450 60 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 Gene3D Cytochrome P450 53 330 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy12g1773 333 PANTHER OS08G0547900 PROTEIN 35 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1769 Lcy-Chr12:38510941 Lcy12g1773 Lcy-Chr12:38560430 4.23E-138 dispersed
Lcy12g1773 Lcy-Chr12:38560430 Lcy12g1766 Lcy-Chr12:38475058 2.93E-66 dispersed
Lcy12g1770 Lcy-Chr12:38524490 Lcy12g1773 Lcy-Chr12:38560430 7.07E-134 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g1773 - - - 0.0