Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy12g1947 ATGCAATTTGGAAGCGCATACGACCTTCGTGCGCTTGGCCTATGCCGACGAATTGGTGGGAGATTTGTAACGAATTTGGAGGCGTTTCGGGACAAATCAGGCGGAACCGGAGTGGCTGGAGGCTGCACGGACCGAACGGAGTCTGTGGGACTCGGCCTCGGCCAGGCCGAGCAGTGGGGTCGGGCCAAATGCCCGACCCCTTCGGTCTTGACCCGTCCCATTTGCCGGTTTCGCCTCTGGGGTCCATCTCTTAGCCCTATTTCTACCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGATCCTGGCGAGTTTCCCGATTTAATCGGCGATTCATTCTTACAGGTTCCGCTTTCCGTCTGTCTGTCTTCGCATCGCAGCCCAAATTTTGTCTCGCTTCAATCTCCAACCCCATTTCATCTCTTCACCTTTCACCACTTCTCCGGCGGATCCGGATTCGACTCTGAGCTCCGGTCAGTGTATGGAATGACGGACTACCGATTACCTCCGACCATGAATCTCTGGGCGGATGAGAACGCCTCGATGATGGACGCCTTCATGACCACCGATCTGAGTTCCTTCTGGGTCAATCCGCCGCAGCCGCAGCAAATTCCTCAGCCGCCCTATTCCTCTGTTTCCGCCGCGCCGGACACGAGTAAAGCCGTCGGTCAATCGCCGCCGCCGACGTCGGTGGCGGTTTTCAACCAGGAGACTCTCCAGCAGCGGCTTCAAGCCTTGATTGAAGGGGCTAACGAGAGCTGGACTTACGCTATCTTCTGGCAGTCCTCGTACGACTACTCCGGCGCCACCGTCTTGGGCTGGGGGGACGGGTACTACAAAGGCGAAGAAGATAAAGGCAAAGAGAAGGCCAAATCGACGACCTCGAAGGCCGAGCAAGAGCATCGTAAGAAGGTACTTCGCGAGCTCAACTCTCTCATTTCTGGTTCTCCTACCTCTGAAGACGACGCCGTCGACGAGGTCGTCACCGACACCGAGTGGTTCTTCTTGGTGTCGATGACTCAGTCCTTCGTCGCCGGCGTCGGATTGCCGGGACAGGCGTTTTTCGACTCGAACCCTATTTGGGTCGCCGGTTCGGATCGGCTTGCGAGCTCGTTCTGCGAACGGGCTCGTCAGGGTCAGGTTTTCGGGTTGCAGACCATGGTTTGTATTCCGTCGGCGAATGGAGTCGTTGAATTGGGTTCGAGTGAGTTGATTTACCAGAGCTCCGATCTGATGAATAAGGTTAGGGTTTTGTTCAATTTCAACAATCTGGAGGTTGAAACTTGGCCAATTAGTGGTGTTGACCAAGGGGAAAACGACCCGTCTTCGCTTTGGATCAGCGAGCCATCAAACGCCATTGAAATCAAGGACCCTGTCACTGTGAGTAGCAATAACAACAATCCTGTTGCTTCAGCTCCAGCTCCAGCTCCAACTCCAGCTCCCAGCTCCACAAACAGCCAGCCGATTTCCAAAATTACGACAGAGATTGAAAATCCCAAATCGAGTGTTGTAACTGAAACTCCAACCTCTGTTCCTCCTTCCCAAAAGAGCCACCGACAGTCGCAGCCGGTTCACACGCAGAGCTTCTTCACCAGGGAATTGAACTTCTCTGAATTTGGCTACGATAATGGCAGCTTCAAGGATGGGAATTCGCATTCTCTCAAGCCGGAATCCGGCGAGATTCTCAACTTTGGCGAGAGCAAGAGGAGTTCTTATCCCAACACAGATAACTTGCCTTCGGGCAATTCCCAATTTGGAGCGGATGAGAACAAGAAGAAGAGATCCCCCACTTCTCGTGGGAGTAATGAAGAGGGGATGCTTTCTTTTACTTCTGGTGTGATTCTTCCATCCTCCGGCACCGCGAAATCGGGCGGTGGCATTGGCGATTCCGACCACTCTGACCTTGAAGCTTCGGTGATCCGTGAGGTGGAGAGTAGTAGAGTGGTTGAGCCGGAGAAGCGGCCTCGCAAACGGGGGCGAAAGCCTGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCTGAGAGGCAGAGGAGAGAAAAGCTAAACCAAAGATTCTATGCTCTTCGAGCTGTGGTTCCAAATGTATCAAAAATGGACAAAGCTTCACTTCTTGGTGATGCAATCTCTTATATCAATGAGCTCAGAGGGAAGCTTCAAACTGCAGAATCAGACAAGGAGGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTGATGATGCCTAGTAAAGATTCAAGTATATCAAGCTCAAATCAACCCCCACCAGATCAAGACATAAAAGTATCAAACATCCATGGAAATAACAGTGGTATCAAAACCGATATCGACGTGAAGATAATCAGTTGGGACGCCATGATTCGGATCCAATCTAGTAAGAAAAACCATCCCGCTGCGCGGCTGATGGCAGCTTTGGAAGAACTGGACTTGGATATCAACCACGCAAGCATTTCAGTTGTCAATGATCTGATGATCCAACAAGCAACTGTCAAGATGAGTCGATTATACACTCAGGAGCAGCTAACGATAGCTCTATCATCGAAAATAGGCGCAACTCGGTAG 2562 51.56 MQFGSAYDLRALGLCRRIGGRFVTNLEAFRDKSGGTGVAGGCTDRTESVGLGLGQAEQWGRAKCPTPSVLTRPICRFRLWGPSLSPISTRLSSSAPCTSDPGEFPDLIGDSFLQVPLSVCLSSHRSPNFVSLQSPTPFHLFTFHHFSGGSGFDSELRSVYGMTDYRLPPTMNLWADENASMMDAFMTTDLSSFWVNPPQPQQIPQPPYSSVSAAPDTSKAVGQSPPPTSVAVFNQETLQQRLQALIEGANESWTYAIFWQSSYDYSGATVLGWGDGYYKGEEDKGKEKAKSTTSKAEQEHRKKVLRELNSLISGSPTSEDDAVDEVVTDTEWFFLVSMTQSFVAGVGLPGQAFFDSNPIWVAGSDRLASSFCERARQGQVFGLQTMVCIPSANGVVELGSSELIYQSSDLMNKVRVLFNFNNLEVETWPISGVDQGENDPSSLWISEPSNAIEIKDPVTVSSNNNNPVASAPAPAPTPAPSSTNSQPISKITTEIENPKSSVVTETPTSVPPSQKSHRQSQPVHTQSFFTRELNFSEFGYDNGSFKDGNSHSLKPESGEILNFGESKRSSYPNTDNLPSGNSQFGADENKKKRSPTSRGSNEEGMLSFTSGVILPSSGTAKSGGGIGDSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMMPSKDSSISSSNQPPPDQDIKVSNIHGNNSGIKTDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDINHASISVVNDLMIQQATVKMSRLYTQEQLTIALSSKIGATR 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40825210 40832258 - Maker00038145 Lcy12g1947 650010

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lcy12g1947 853 CDD bHLH_AtAIB_like 663 738 - -
Lcy12g1947 853 Pfam Helix-loop-helix DNA-binding domain 670 716 IPR011598 GO:0046983(InterPro)
Lcy12g1947 853 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 666 715 IPR011598 GO:0046983(InterPro)
Lcy12g1947 853 MobiDBLite consensus disorder prediction 457 525 - -
Lcy12g1947 853 MobiDBLite consensus disorder prediction 563 585 - -
Lcy12g1947 853 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 669 738 IPR036638 GO:0046983(InterPro)
Lcy12g1947 853 MobiDBLite consensus disorder prediction 482 525 - -
Lcy12g1947 853 Pfam Plant bHLH transcription factor, ACT-like domain 776 834 IPR054502 -
Lcy12g1947 853 SMART finulus 672 721 IPR011598 GO:0046983(InterPro)
Lcy12g1947 853 FunFam Transcription factor bHLH13 659 733 - -
Lcy12g1947 853 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 238 418 IPR025610 -
Lcy12g1947 853 MobiDBLite consensus disorder prediction 563 604 - -
Lcy12g1947 853 MobiDBLite consensus disorder prediction 206 227 - -
Lcy12g1947 853 Gene3D - 665 741 IPR036638 GO:0046983(InterPro)
Lcy12g1947 853 MobiDBLite consensus disorder prediction 612 631 - -
Lcy12g1947 853 MobiDBLite consensus disorder prediction 636 676 - -
Lcy12g1947 853 Coils Coil 712 739 - -
Lcy12g1947 853 PANTHER MYC 225 848 IPR045084 GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)
Lcy12g1947 853 MobiDBLite consensus disorder prediction 197 227 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy12g1947 K13422 - - csv:101218165 1051.58
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g1947 Lcy-Chr12:40825210 Lcy4g1104 Lcy-Chr4:21769977 9.66E-51 dispersed
Lcy12g1947 Lcy-Chr12:40825210 Lcy6g2225 Lcy-Chr6:46675617 4.94E-253 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g671 Blo02g00993 . . . . . Bma07g00930 Bma14g00153 Cmo06g00657 Cmo16g01208 Cma02g01614 . Car02g01373 . Sed08g1916 Cpe14g00960 Cpe05g00176 Bhi11g00156 Tan01g2188 Cmetu06g1892 . Hepe06g1772 Mch10g1654 . Cla10g00159 Cam10g0160 Cec10g0170 Cco10g0168 Clacu10g0161 Cmu10g1010 Cre10g0420 Cone8ag0471 Cone12ag0465 . . Lsi07g01198 . Chy04g00093 Cme06g02473 Blo03g00858 Blo19g00189 Bda07g00099 Bda09g00724 Bpe08g00833 Bpe11g00336 . . Sed01g4108 Cmo02g01657 Cmo19g00251 Cma06g00648 Cma16g01157 Car06g00579 Car16g01097 . Cpe15g00214 Bhi05g00500 Tan07g1978 Cmetu04g2523 Lac11g2414 Hepe06g1020 . Lcy12g1947 Cla09g01129 Cam09g1183 Cec09g1195 Cco09g1216 . . Cre09g1145 . Csa03g04609 Chy06g02143 Cme04g00117
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lcy13g0510 . 211 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 50.2 6.0e-63 239.2
Lcy9g1226 . 133 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 76.6 8.6e-50 194.5
Lcy6g1353 . 1 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.7 2.1e-48 189.9
Lcy8g1461 . 4 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 57.8 4.6e-43 172.2
Lcy11g0678 . 2 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.1 3.7e-62 235.7
Lcy6g1339 . 218 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 52.7 1.3e-45 181.4
Lcy10g0049 . 41 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.9 1.0e-113 407.9
Lcy8g1211 . 52 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 60.0 2.8e-51 199.9
Lcy1g0629 . 145 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.0 3.2e-47 186.4
Lcy11g2055 . 14 608 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.7 8.6e-155 544.7
Lcy5g2095 . 158 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 4.9e-41 165.6
Lcy12g0860 . 38 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 61.2 7.0e-44 174.9
Lcy11g1331 . 41 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 58.1 1.6e-40 163.7
Lcy12g0860 . 36 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.2 2.1e-45 179.9
Lcy11g1331 . 41 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.7 6.5e-39 158.3
Lcy2g2346 . 46 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 59.0 9.7e-37 151.0
Lcy11g1058 . 41 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 62.4 1.2e-45 180.3
Lcy11g1058 . 39 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 7.4e-42 167.5
Lcy1g0979 . 127 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 50.4 1.6e-42 171.0
Lcy4g0132 . 177 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 56.2 4.8e-46 182.6
Lcy8g1939 . 50 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 54.6 3.4e-62 236.1
Lcy12g2140 . 1 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 50.4 9.8e-130 461.1
Lcy10g0891 . 32 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.5 2.2e-76 283.5
Lcy7g1401 . 19 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.2 9.3e-75 278.1
Lcy7g0420 . 60 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.7 1.7e-68 257.3
Lcy7g0414 . 60 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.7 1.7e-68 257.3
Lcy11g0678 . 64 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.1 4.4e-40 162.9
Lcy13g2290 . 1 253 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 54.1 5.9e-55 212.2
Lcy2g0610 . 19 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.9 1.6e-44 177.6
Lcy2g0318 . 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 59.4 7.9e-53 204.5
Lcy13g2087 . 110 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 87.8 2.5e-41 166.4
Lcy8g0681 . 26 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 67.4 1.0e-39 161.0
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 59.5 1.3e-38 158.7
Lcy1g1143 . 46 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 60.4 1.2e-36 150.6
Lcy12g2203 . 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 61.2 3.7e-45 180.3
Lcy1g1143 . 77 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.4e-41 167.2
Lcy5g2422 . 91 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 64.1 2.5e-44 176.4
Lcy11g1508 . 1 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 59.8 7.7e-47 184.5
Lcy5g0651 . 22 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 50.4 6.4e-42 168.3
Lcy9g2004 . 212 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.9 4.6e-45 179.9
Lcy8g1118 . 135 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 51.1 2.7e-37 154.1
Lcy12g1947 . 233 850 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.4 5.6e-146 515.4
Lcy6g2225 . 68 653 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.0 1.8e-144 510.4
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 57.5 9.5e-37 152.5
Lcy5g2422 . 82 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 62.4 1.2e-47 187.6
Lcy9g2042 . 239 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 83.0 2.2e-38 156.8
Lcy6g0477 . 250 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 70.4 1.2e-36 151.0
Lcy4g1889 . 109 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 50.7 1.1e-36 151.4
Lcy8g1118 . 118 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 53.5 8.8e-39 158.3
Lcy3g1006 . 230 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 75.5 5.7e-38 155.6
Lcy3g1560 . 67 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.9 1.1e-95 347.1
Lcy2g1721 . 64 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 52.1 7.4e-60 228.0
Lcy2g0166 . 160 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.3 2.1e-46 183.3
Lcy4g2025 . 170 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 63.8 1.1e-42 171.0
Lcy12g1947 . 162 850 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 1.1e-173 607.4
Lcy6g2225 . 1 654 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.0 7.4e-165 578.2
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.9 3.8e-36 150.6
Lcy5g0651 . 1 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.3 6.0e-77 285.4
Lcy1g0855 . 180 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 1.5e-60 230.7
Lcy13g1454 . 142 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.5 2.0e-57 220.3
Lcy9g1656 . 121 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 56.7 1.5e-49 194.1
Lcy10g1539 . 333 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 83.5 5.7e-39 159.5
Lcy7g0378 . 361 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 2.8e-38 157.1
Lcy3g1006 . 236 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 83.9 3.7e-38 156.8
Lcy3g1006 . 223 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 1.7e-43 174.1
Lcy10g1539 . 334 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 7.0e-37 152.1
Lcy7g0378 . 362 454 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.6e-36 151.0
Lcy11g1272 . 341 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 65.9 1.6e-36 151.0
Lcy3g1006 . 217 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.1e-39 160.6
Lcy4g2025 . 168 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.9 1.4e-63 240.4
Lcy2g0166 . 198 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 61.6 2.5e-63 239.6
Lcy3g1560 . 132 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 2.8e-43 172.9
Lcy2g1721 . 146 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 52.9 2.9e-40 162.9
Lcy4g2025 . 35 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 51.9 2.9e-57 219.9
Lcy2g0166 . 209 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 62.1 3.2e-56 216.5
Lcy3g1560 . 143 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.6 7.0e-43 172.2
Lcy2g1721 . 160 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 51.9 2.6e-37 153.7
Lcy3g1560 . 1 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 60.2 1.7e-91 333.6
Lcy4g2025 . 170 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.0 1.3e-38 157.9
Lcy7g0378 . 352 536 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 56.8 2.2e-44 177.2
Lcy10g1539 . 324 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 77.6 3.9e-41 166.4
Lcy13g2155 . 207 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 72.4 7.4e-40 162.2
Lcy11g1272 . 341 543 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.0 7.3e-43 172.2
Lcy10g1539 . 324 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 54.3 3.4e-40 163.3
Lcy7g0378 . 355 537 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 52.7 7.5e-40 162.2
Lcy3g1006 . 223 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.7 4.1e-38 156.4
Lcy9g2004 . 220 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 55.9 7.8e-37 152.1
Lcy10g1539 . 320 481 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 54.5 5.2e-38 156.4
Lcy7g0378 . 355 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 77.5 2.0e-37 154.5
Lcy3g1006 . 225 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 73.6 2.2e-36 151.0
Lcy2g0610 . 127 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 80.6 3.7e-36 150.2
Lcy2g0610 . 1 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.8 6.5e-68 255.0
Lcy9g0066 . 24 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 55.9 4.5e-51 198.7
Lcy9g0066 . 24 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.2 4.0e-64 242.3
Lcy2g0166 . 173 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.7 7.3e-54 208.4
Lcy4g2025 . 170 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 72.6 2.1e-53 206.8
Lcy3g1560 . 126 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.8 3.4e-43 172.9
Lcy2g1721 . 147 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 50.2 3.0e-39 159.8
Lcy10g1145 . 127 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.5 1.2e-43 174.5
Lcy6g0477 . 231 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 68.3 1.5e-39 161.0
Lcy9g2042 . 240 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 80.8 1.9e-37 154.1
Lcy9g2042 . 240 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 96.5 1.2e-39 161.4
Lcy6g0477 . 259 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 89.2 2.1e-39 160.6
Lcy10g1145 . 97 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 58.8 1.7e-45 180.6
Lcy3g2191 . 123 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.2 3.7e-63 239.6
Lcy12g0724 . 81 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 54.3 9.9e-40 161.8
Lcy13g2087 . 110 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 91.3 9.4e-41 164.5
Lcy8g0681 . 69 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 89.1 3.6e-40 162.5
Lcy12g1955 . 101 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.4 3.4e-44 176.4
Lcy13g1533 . 2 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.5 8.1e-56 214.9
Lcy12g1955 . 102 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.3 1.0e-42 171.4
Lcy6g1062 . 115 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 53.3 1.3e-37 154.5
Lcy11g1771 . 68 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.6 1.2e-86 317.8
Lcy6g0095 . 9 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 52.1 5.0e-70 262.3
Lcy12g2140 . 1 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 50.4 9.8e-130 461.1
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 59.5 1.3e-38 158.7
Lcy12g1947 . 233 850 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 53.4 5.6e-146 515.4
Lcy6g2225 . 68 653 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.0 1.8e-144 510.4
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 57.5 9.5e-37 152.5
Lcy12g1947 . 162 850 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 1.1e-173 607.4
Lcy6g2225 . 1 654 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.0 7.4e-165 578.2
Lcy9g0152 . 1 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.9 3.8e-36 150.6
Lcy3g1560 . 1 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 60.2 1.7e-91 333.6
Lcy4g2025 . 170 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.0 1.3e-38 157.9
Lcy13g0510 . 211 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 50.2 6.0e-63 239.2
Lcy11g2055 . 14 608 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.7 8.6e-155 544.7
Lcy1g0979 . 127 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 50.4 1.6e-42 171.0
Lcy4g0132 . 177 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 56.2 4.8e-46 182.6
Lcy8g1939 . 50 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 54.6 3.4e-62 236.1
Lcy10g0891 . 32 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.5 2.2e-76 283.5
Lcy7g1401 . 19 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.2 9.3e-75 278.1
Lcy7g0420 . 60 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.7 1.7e-68 257.3
Lcy7g0414 . 60 399 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.7 1.7e-68 257.3
Lcy11g0678 . 64 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.1 4.4e-40 162.9
Lcy13g2290 . 1 253 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 54.1 5.9e-55 212.2
Lcy2g0610 . 19 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.9 1.6e-44 177.6
Lcy2g0318 . 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 59.4 7.9e-53 204.5
Lcy13g2087 . 110 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 87.8 2.5e-41 166.4
Lcy8g0681 . 26 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 67.4 1.0e-39 161.0
Lcy1g1143 . 46 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 60.4 1.2e-36 150.6
Lcy12g2203 . 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 61.2 3.7e-45 180.3
Lcy1g1143 . 77 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 1.4e-41 167.2
Lcy5g2422 . 91 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 64.1 2.5e-44 176.4
Lcy11g1508 . 1 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 59.8 7.7e-47 184.5
Lcy5g0651 . 22 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42300 50.4 6.4e-42 168.3
Lcy9g2004 . 212 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.9 4.6e-45 179.9
Lcy8g1118 . 135 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 51.1 2.7e-37 154.1
Lcy5g2422 . 82 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 62.4 1.2e-47 187.6
Lcy9g2042 . 239 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 83.0 2.2e-38 156.8
Lcy6g0477 . 250 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 70.4 1.2e-36 151.0
Lcy4g1889 . 109 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 50.7 1.1e-36 151.4
Lcy8g1118 . 118 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 53.5 8.8e-39 158.3
Lcy3g1006 . 230 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36540 75.5 5.7e-38 155.6
Lcy3g1560 . 67 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.9 1.1e-95 347.1
Lcy2g1721 . 64 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 52.1 7.4e-60 228.0
Lcy2g0166 . 160 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.3 2.1e-46 183.3
Lcy4g2025 . 170 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 63.8 1.1e-42 171.0
Lcy5g0651 . 1 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.3 6.0e-77 285.4
Lcy1g0855 . 180 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.8 1.5e-60 230.7
Lcy13g1454 . 142 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 62.5 2.0e-57 220.3
Lcy9g1656 . 121 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 56.7 1.5e-49 194.1
Lcy10g1539 . 333 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 83.5 5.7e-39 159.5
Lcy7g0378 . 361 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 82.5 2.8e-38 157.1
Lcy3g1006 . 236 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 83.9 3.7e-38 156.8
Lcy3g1006 . 223 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 51.7 1.7e-43 174.1
Lcy10g1539 . 334 426 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 7.0e-37 152.1
Lcy7g0378 . 362 454 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 79.6 1.6e-36 151.0
Lcy11g1272 . 341 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 65.9 1.6e-36 151.0
Lcy3g1006 . 217 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 79.1 2.1e-39 160.6
Lcy4g2025 . 168 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.9 1.4e-63 240.4
Lcy2g0166 . 198 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 61.6 2.5e-63 239.6
Lcy3g1560 . 132 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 2.8e-43 172.9
Lcy2g1721 . 146 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 52.9 2.9e-40 162.9
Lcy4g2025 . 35 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 51.9 2.9e-57 219.9
Lcy2g0166 . 209 423 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 62.1 3.2e-56 216.5
Lcy3g1560 . 143 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.6 7.0e-43 172.2
Lcy2g1721 . 160 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 51.9 2.6e-37 153.7
Lcy7g0378 . 352 536 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 56.8 2.2e-44 177.2
Lcy10g1539 . 324 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 77.6 3.9e-41 166.4
Lcy13g2155 . 207 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 72.4 7.4e-40 162.2
Lcy11g1272 . 341 543 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.0 7.3e-43 172.2
Lcy10g1539 . 324 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 54.3 3.4e-40 163.3
Lcy7g0378 . 355 537 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 52.7 7.5e-40 162.2
Lcy3g1006 . 223 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 65.7 4.1e-38 156.4
Lcy9g2004 . 220 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 55.9 7.8e-37 152.1
Lcy10g1539 . 320 481 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 54.5 5.2e-38 156.4
Lcy7g0378 . 355 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 77.5 2.0e-37 154.5
Lcy3g1006 . 225 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 73.6 2.2e-36 151.0
Lcy2g0610 . 127 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 80.6 3.7e-36 150.2
Lcy2g0610 . 1 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.8 6.5e-68 255.0
Lcy9g0066 . 24 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 55.9 4.5e-51 198.7
Lcy9g0066 . 24 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.2 4.0e-64 242.3
Lcy2g0166 . 173 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.7 7.3e-54 208.4
Lcy4g2025 . 170 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 72.6 2.1e-53 206.8
Lcy3g1560 . 126 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.8 3.4e-43 172.9
Lcy2g1721 . 147 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 50.2 3.0e-39 159.8
Lcy10g1145 . 127 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 68.5 1.2e-43 174.5
Lcy6g0477 . 231 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 68.3 1.5e-39 161.0
Lcy9g2042 . 240 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 80.8 1.9e-37 154.1
Lcy9g2042 . 240 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 96.5 1.2e-39 161.4
Lcy6g0477 . 259 351 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 89.2 2.1e-39 160.6
Lcy10g1145 . 97 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 58.8 1.7e-45 180.6
Lcy3g2191 . 123 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 51.2 3.7e-63 239.6
Lcy12g0724 . 81 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 54.3 9.9e-40 161.8
Lcy13g2087 . 110 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 91.3 9.4e-41 164.5
Lcy8g0681 . 69 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 89.1 3.6e-40 162.5
Lcy12g1955 . 101 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 54.4 3.4e-44 176.4
Lcy13g1533 . 2 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.5 8.1e-56 214.9
Lcy12g1955 . 102 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.3 1.0e-42 171.4
Lcy6g1062 . 115 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 53.3 1.3e-37 154.5
Lcy11g1771 . 68 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.6 1.2e-86 317.8
Lcy6g0095 . 9 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 52.1 5.0e-70 262.3
Lcy9g1226 . 133 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 76.6 8.6e-50 194.5
Lcy6g1353 . 1 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.7 2.1e-48 189.9
Lcy8g1461 . 4 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 57.8 4.6e-43 172.2
Lcy11g0678 . 2 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 58.1 3.7e-62 235.7
Lcy6g1339 . 218 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 52.7 1.3e-45 181.4
Lcy10g0049 . 41 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.9 1.0e-113 407.9
Lcy8g1211 . 52 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 60.0 2.8e-51 199.9
Lcy1g0629 . 145 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.0 3.2e-47 186.4
Lcy5g2095 . 158 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 65.9 4.9e-41 165.6
Lcy12g0860 . 38 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 61.2 7.0e-44 174.9
Lcy11g1331 . 41 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 58.1 1.6e-40 163.7
Lcy12g0860 . 36 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.2 2.1e-45 179.9
Lcy11g1331 . 41 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.7 6.5e-39 158.3
Lcy2g2346 . 46 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 59.0 9.7e-37 151.0
Lcy11g1058 . 41 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 62.4 1.2e-45 180.3
Lcy11g1058 . 39 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 7.4e-42 167.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001444 2 2 4 3 3 2 4 2 2 2 2 2 4 2 2 4 2 2 4 2 2 2 2 2 3 1 2 2 2 1 71
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19298 None None None None Lcy TF