Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy12g2203 | ATGTTGGTTTGGGGAGATGGATTCTACAATGGACCCATCAAGACCACCAAGACGCTGCACCCCGCCGCCACCCATCTCACCGCCCAACAACAACAACCACCCTCTCGAACCCATCAGCTCAGGGATCTCTACAACTCCTTATCCGCCGCCGACACAGACACTACCCTCCGCCGCCCCTCCGCCGCTCTCTCTCCGGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCCTTCTCTTTTCCTCCGGGCCGAGGATTGCCTGGAAACGCATTTGCCAACAACACACATGTGTGGATTACAGGCGCAAATGACATTGACACCAAAATTTTCTCCAGAGCTATTCTTGCTAAGAGTGCTCGCATAAAGACAGTGGTTTGCATTCCTCTTATGGATGGTGTGGTTGAACTAGGCACCACAGATAAGGTGATAGAGAATGAATTTGTTTTAGTTGAGCTCAAAAGAAACCCAGTCGGCAGCACAAAAACCAGCACTCTCGGAGCTCTCGACATCGAATTCTGCCACTTCATTGGAGCATTATAA | 549 | 50.64 | MLVWGDGFYNGPIKTTKTLHPAATHLTAQQQQPPSRTHQLRDLYNSLSAADTDTTLRRPSAALSPEDLTESEWFYLLCLSFSFPPGRGLPGNAFANNTHVWITGANDIDTKIFSRAILAKSARIKTVVCIPLMDGVVELGTTDKVIENEFVLVELKRNPVGSTKTSTLGALDIEFCHFIGAL | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 43272674 | 43274623 | - | Maker00038163 | Lcy12g2203 | 650266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy12g2203 | 182 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 1 | 156 | IPR025610 | - | |
Lcy12g2203 | 182 | PANTHER | TRANSCRIPTION FACTOR TT8 | 1 | 152 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g2203 | Lcy-Chr12:43272674 | Lcy13g0686 | Lcy-Chr13:9856444 | 1.64E-40 | dispersed | |
Lcy12g2203 | Lcy-Chr12:43272674 | Lcy6g2225 | Lcy-Chr6:46675617 | 2.06E-17 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy12g2203 | - | - | - | 0.0 |